General information
|
Deletion
|
OCL88-5
|
D or ND
|
D
|
Location (BP)
|
1,753,734 - 1,756,870
|
Length (BP)
|
3,137
|
Related strains
|
Strains
|
|
|
System
|
red(SD15)
|
|
Primer
|
Deleted Region
|
5'
|
Primer
|
L88-5A-CmN
|
Sequence
|
5'ccTTcTcAAcTTAAAgAcTAAgAcTgTcATgAAAAAgAcccTggTgTcccTgTTgATAcc3'
|
3'
|
Primer
|
L88-2B-CmC
|
Sequence
|
5'TgcAcTTAgcTAAAcTAAAAggAcAgcTTTcATccggTTgcAcTTATTcAggcgTAgcAc3'
|
Sequences
|
Nucleotide
Fasta Format
View sequence out neighbor 100bp
|
-00100 CACTTTCGTA ATACCGGATT CGCTTTCCGG
-00070 CAGTGCGCCC AGAAAGCAAG TTTCTCCCAT CCTTCTCAAC TTAAAGACTA AGACTGTCAT GAAAAAGACC
000001 AAAATTGTTT GCACCATCGG ACCGAAAACC GAATCTGAAG AGATGTTAGC TAAAATGCTG GACGCTGGCA
000071 TGAACGTTAT GCGTCTGAAC TTCTCTCATG GTGACTATGC AGAACACGGT CAGCGCATTC AGAATCTGCG
000141 CAACGTGATG AGCAAAACTG GTAAAACCGC CGCTATCCTG CTTGATACCA AAGGTCCGGA AATCCGCACC
000211 ATGAAACTGG AAGGCGGTAA CGACGTTTCT CTGAAAGCTG GTCAGACCTT TACTTTCACC ACTGATAAAT
000281 CTGTTATCGG CAACAGCGAA ATGGTTGCGG TAACGTATGA AGGTTTCACT ACTGACCTGT CTGTTGGCAA
000351 CACCGTACTG GTTGACGATG GTCTGATCGG TATGGAAGTT ACCGCCATTG AAGGTAACAA AGTTATCTGT
000421 AAAGTGCTGA ACAACGGTGA CCTGGGCGAA AACAAAGGTG TGAACCTGCC TGGCGTTTCC ATTGCTCTGC
000491 CAGCACTGGC TGAAAAAGAC AAACAGGACC TGATCTTTGG TTGCGAACAA GGCGTAGACT TTGTTGCTGC
000561 TTCCTTTATT CGTAAGCGTT CTGACGTTAT CGAAATCCGT GAGCACCTGA AAGCGCACGG CGGCGAAAAC
000631 ATCCACATCA TCTCCAAAAT CGAAAACCAG GAAGGCCTCA ACAACTTCGA CGAAATCCTC GAAGCCTCTG
000701 ACGGCATCAT GGTTGCGCGT GGCGACCTGG GTGTAGAAAT CCCGGTAGAA GAAGTTATCT TCGCCCAGAA
000771 GATGATGATC GAAAAATGTA TCCGTGCACG TAAAGTCGTT ATCACTGCGA CCCAGATGCT GGATTCCATG
000841 ATCAAAAACC CACGCCCGAC TCGCGCAGAA GCCGGTGACG TTGCAAACGC CATCCTCGAC GGTACTGACG
000911 CAGTGATGCT GTCTGGTGAA TCCGCAAAAG GTAAATACCC GCTGGAAGCG GTTTCTATCA TGGCGACCAT
000981 CTGCGAACGT ACCGACCGCG TGATGAACAG CCGTCTCGAG TTCAACAATG ACAACCGTAA ACTGCGCATT
001051 ACCGAAGCGG TATGCCGTGG TGCCGTTGAA ACTGCTGAAA AACTGGATGC TCCGCTGATC GTGGTTGCTA
001121 CTCAGGGCGG TAAATCTGCT CGCGCAGTAC GTAAATACTT CCCGGATGCC ACCATCCTGG CACTGACCAC
001191 CAACGAAAAA ACGGCTCATC AGTTGGTACT GAGCAAAGGC GTTGTGCCGC AGCTTGTTAA AGAGATCACT
001261 TCTACTGATG ATTTCTACCG TCTGGGTAAA GAACTGGCTC TGCAGAGCGG TCTGGCACAC AAAGGTGACG
001331 TTGTAGTTAT GGTTTCTGGT GCACTGGTAC CGAGCGGCAC TACTAACACC GCATCTGTTC ACGTCCTGTA
001401 ATATTGCTTT TGTGAATTAA TTTGTATATC GAAGCGCCCT GATGGGCGCT TTTTTTATTT AATCGATAAC
001471 CAGAAGCAAT AAAAAATCAA ATCGGATTTC ACTATATAAT CTCACTTTAT CTAAGATGAA TCCGATGGAA
001541 GCATCCTGTT TTCTCTCAAT TTTTTTATCT AAAACCCAGC GTTCGATGCT TCTTTGAGCG AACGATCAAA
001611 AATAAGTGCC TTCCCATCAA AAAAATATTC TCAACATAAA AAACTTTGTG TAATACTTGT AACGCTACAT
001681 GGAGATTAAC TCAATCTAGA GGGTATTAAT AATGAAAGCT ACTAAACTGG TACTGGGCGC GGTAATCCTG
001751 GGTTCTACTC TGCTGGCAGG TTGCTCCAGC AACGCTAAAA TCGATCAGCT GTCTTCTGAC GTTCAGACTC
001821 TGAACGCTAA AGTTGACCAG CTGAGCAACG ACGTGAACGC AATGCGTTCC GACGTTCAGG CTGCTAAAGA
001891 TGACGCAGCT CGTGCTAACC AGCGTCTGGA CAACATGGCT ACTAAATACC GCAAGTAATA GTACCTGTGA
001961 AGTGAAAAAT GGCGCACATT GTGCGCCATT TTTTTTGTCT GCCGTTTACC GCTACTGCGT CACGCGTAAC
002031 ATATTCCCTT GCTCTGGTTC ACCATTCTGC GCTGACTCTA CTGAAGGCGC ATTGCTGGCT GCGGGAGTTG
002101 CTCCACTGCT CACCGAAACC GGATACCCTG CCCGACGATA CAACGCTTTA TCGACTAACT TCTGATCTAC
002171 AGCCTTATTG TCTTTAAATT GCGTAAAGCC TGCTGGCAGT GTGTATGGCA TTGTCTGAAC GTTCTGCTGT
002241 TCTTCTGCCG ATAGTGGTCG ATGTACTTCA ACATAACGCA TCCCGTTAGG CTCCACGGAA TATTTCACCG
002311 GTTCGTTGAT CACTTTCACC GGCGTTCCCG TCCGCACGCT GGAGAACAAG GCTTTAATAT CCGGTGCATT
002381 CATGCGAATA CACCCTGAAC TGACGCGCAA ACCGACGCTG TCCGGCGCAC TGGTACCATG AATGAGGTAT
002451 TCGCCATTAC CATGCGCGAG GCGCAGTGCG TAACGTCCTA GCGGGTTATT TGGTCCGGCA GGAACGACTG
002521 GCGGTAATTT AATGCCACGC TCCAGCGAAC GCTGACGAAT GCCTGCCGTA GGCGTCCAGG TTGGGTTAGG
002591 GATTTTCTGC CCAACACGCG TTTCCATCAC CGGCGTTTCC AGCCCCTGCA ATCCAATACC TATTGGATAA
002661 ACCTGCACAA TATTTTCTCC CGGCGGATAA TAATAAAGGC GCAGCTCTGC AAGGTTAACG ATAATCCCCT
002731 GACGCGGTGC ATCAGGTAAT AACAGTTGTG AAGGAATAGT TATCGTCGTA CCAGGTTTTG GCACCGGGGC
002801 GATAGTGTTA TTGGCTTCAA GGATCAACAT TGCCGCAGTA TCAAAACGTC GGGCAATAGC CTGAAGGTTT
002871 TTATCCCCTT CTTGCACCGT ATACGTTTGA TTTTGCCCAA CCAGTCGGCT TCCGGTTGGT GGTAGCGGAT
002941 AATCAACCGC CCAGGCAGCC TGGATGGCGC TAAAAGCGCC GATAAGCGTG AGTGTAAGCA AAGACGCGCG
003011 TTTCATTGTA AACCTCCTGT ATTTGCCGGA GACTCACGCT GAAACGTCGG ATGGCGCTTA TGTTCACCTG
003081 AAACCAAAAC ACTCCTGTGC AGGTCAGTGT AAACATTGAC CATCCGGCAA TGTGAGCCAA CCGGATGAAA
003151 GCTGTCCTTT TAGTTTAGCT AAGTGCAGCG GCTTTGGCGC GAATTGCGCG AATCATCGCT TCCAGACCTT
003221 GTGAACGAGA TGGGGTG
|