|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR60
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bssS
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bssS
Search strains by all related name:
bssS b1060 ECK1045 f84 JW5152 yceP
|
General information (Go to Linear View: )
|
|
Gene Name
|
bssS
|
|
Alternative name
|
b1060,ECK1045,f84,JW5152,yceP
|
|
Location, Length
|
1,119,924 - 1,120,178
(
-
)
;
24.14
min
;
255
(bp) ,
84
(aa)
|
|
Product
|
biofilm regulator
|
|
Operon Name
|
bssS
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1787299
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YCEP_ECOLI
(
P75927
;
Q9R374
)
|
|
- Protein name
|
Hypothetical protein yceP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yceP; OrderedLocusNames=b1060, c1327;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yceP
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Biofilm regulator bssS
|
|
PSI-BLAST
|
Biofilm regulator bssS
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b1060 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MEKNNEVIQT HPLVGWDIST VDSYDALMLR LHYQTPNKSE QEGTEVGQTL WLTTDVARQF ISILEAGIAK
0071 IESGDFQVNE YRRH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cggtgaatac ccttacttat tggtatactg
-070 aagttgcttc agataaaaac gcattgaacc tcgaataacg ttgtctagta acacgaatta gggggccatg
0001 atggaaaaaa ataatgaagt cattcagact catccgctcg tagggtggga catcagcacc gttgatagct
0071 atgatgcgct gatgttgcgt ttgcactacc agaccccaaa taagtccgag caggaaggga ctgaagttgg
0141 tcagacgctc tggttaacca ctgatgttgc cagacaattt atttcgatat tagaagcagg aatcgccaaa
0211 attgaatccg gtgatttcca ggtaaacgag tatcggcgtc attaacatga catgaccatc cacccaaaag
0281 gcacctcacc ggtgccttta ccatttctgg gttgtatatc tgcattcagt taattactct gcttaaacca
0351 tgaga
|
