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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Deletion
|
OCR32
(D)
|
|
Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yadE
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
yadE
Search strains by all related name:
yadE b0130 ECK0129 JW0126 o409
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General information (Go to Linear View: )
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Gene Name
|
yadE
|
|
Alternative name
|
b0130,ECK0129,JW0126,o409
|
|
Location, Length
|
145,081 - 146,310
(
+
)
;
3.13
min
;
1230
(bp) ,
409
(aa)
|
|
Product
|
putative polysaccharide deacetylase lipoprotein
|
|
Operon Name
|
yadE
|
|
Note
|
conserved hypothetical protein
|
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Function
|
|
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Gene Ontology
|
GO:0003824
;
catalytic activity ( yadE )
GO:0005975
;
carbohydrate metabolic process ( yadE )
GO:0016810
;
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ( yadE )
|
|
PID
|
1786322
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YADE_ECOLI
(
P31666
;
P37022; P75659
)
|
|
- Protein name
|
Hypothetical protein yadE precursor.
|
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- Synonyms
|
|
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- Gene name
|
Name=yadE; OrderedLocusNames=b0130;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
yadE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Human Cystathionine Gamma Lyase
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yadE precursor
|
|
PSI-BLAST
|
Hypothetical protein yadE precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted polysaccharide deacetylase lipoprotein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
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PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MYKQAVILLL MLFTASVSAA LPARYMQTIE NAAVWAQIGD KMVTVGNIRA GQIIAVEPTA ASYYAFNFGF
0071 GKGFIDKGHL EPVQGRQKVE DGLGDLNKPL SNQNLVTWKD TPVYNAPSAG SAPFGVLADN LRYPILHKLK
0141 DRLNQTWYQI RIGDRLAYIS ALDAQPDNGL SVLTYHHILR DEENTRFRHT STTTSVRAFN NQMAWLRDRG
0211 YATLSMVQLE GYVKNKINLP ARAVVITFDD GLKSVSRYAY PVLKQYGMKA TAFIVTSRIK RHPQKWNPKS
0281 LQFMSVSELN EIRDVFDFQS HTHFLHRVDG YRRPILLSRS EHNILFDFAR SRRALAQFNP HVWYLSYPFG
0351 GFNDNAVKAA NDAGFHLAVT TMKGKVKPGD NPLLLKRLYI LRTDSLETMS RLVSNQPQG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCCTTTCGTC CTCAAACATA ATTTGTATGA
-070 GTATTAACCC GCGATTCTGA TGGCGCTTTT GCTACAATAA AAGCGTTGTT TCACCCTCGG TTATTTTTTC
0001 atgtacaaac aagctgttat tctcctgctg atgctgttta ccgcaagtgt cagtgccgcg ttacctgccc
0071 gttatatgca aaccatcgaa aatgctgcgg tctgggcgca aattggtgac aagatggtga ccgtggggaa
0141 tattcgggcc ggacaaatca ttgccgtgga gcccactgcc gcaagttatt acgcatttaa ttttggcttt
0211 ggcaaaggtt ttatcgataa aggtcatctc gagccggttc aggggcgaca aaaagttgaa gacggtttgg
0281 gcgacctcaa caagccgctg agtaatcaga acttagttac ctggaaagat acgccggtct ataacgcgcc
0351 gagtgcggga agtgcgccat ttggggtact ggcggacaat ttgcgctacc cgattttgca taaactgaaa
0421 gacaggttaa atcaaacctg gtatcagatc cgtattggcg atcgactggc ctatatcagc gcactggatg
0491 cccaacccga taatggcctg tcggtgctaa cctatcacca tattctgcgc gacgaagaaa acacccgttt
0561 tcgccatact tcgacgacca catcggtacg cgctttcaat aaccagatgg cctggctgcg tgacagggga
0631 tacgcgacac tgagcatggt gcagctggaa ggctacgtga agaataagat caatctccct gcgcgagcgg
0701 tggtgattac ctttgatgat ggcctcaagt cggtgagccg ctatgcgtat cctgtgttga aacaatatgg
0771 catgaaggcg acggcgttta ttgttacctc acgcatcaaa cgtcacccgc agaagtggaa cccaaaatcg
0841 ctgcaattta tgagcgtttc tgagcttaac gaaattcgcg atgtatttga tttccagtca catacccatt
0911 ttttgcatcg ggtagatggt tatcgccgac ccatattact gagccgtagt gagcacaata ttctgtttga
0981 ttttgcacgt tcacgccgcg ctctggcgca atttaatccg catgtctggt atctttcgta tccgtttggc
1051 ggatttaatg acaacgccgt gaaggcagca aacgatgccg gatttcacct ggcggtgaca accatgaaag
1121 gcaaagtaaa accgggggat aatccgttgt tactaaaacg actttatatc ttaagaacgg attcgctgga
1191 gacgatgtcg cggctggtga gtaaccagcc gcagggataa CAATCAAGCA ACCTGTACCG GAATCGCTTT
1261 CGCGGTACGT TTCATTTCAT TGTCGCCTTC AAAATAGGCG ACGTTGGGTC GCCAGGTGCG AGCTTCTTCA
|
