|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
narU
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
narU
Search strains by all related name:
narU b1469 ECK1463 JW1464 yddF
|
General information (Go to Linear View: )
|
|
Gene Name
|
narU
|
|
Alternative name
|
b1469,ECK1463,JW1464,yddF
|
|
Location, Length
|
1,540,696 - 1,542,084
(
-
)
;
33.21
min
;
1389
(bp) ,
462
(aa)
|
|
Product
|
nitrate/nitrite transporter
|
|
Operon Name
|
narU
|
|
Note
|
nitrite extrusion protein 2; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006807 - nitrogen compound metabolic process
|
|
Function
|
transport; Transport of small molecules: Anions
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( narU )
GO:0006810
;
transport ( narU )
GO:0015103
;
inorganic anion transmembrane transporter activity ( narU )
GO:0015698
;
inorganic anion transport ( narU )
GO:0016020
;
membrane ( narU )
GO:0016021
;
integral to membrane ( narU )
GO:0042128
;
nitrate assimilation ( narU )
|
|
PID
|
1787743
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
NARU_ECOLI
(
P37758
;
P77696
)
|
|
- Protein name
|
Nitrite extrusion protein 2
|
|
- Synonyms
|
Nitrite facilitator 2
|
|
- Gene name
|
Name=narU; OrderedLocusNames=b1469;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
narU
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Nitrite extrusion protein 2
|
|
PSI-BLAST
|
High-affinity glucose transporter SNF3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
nitrate/nitrite transporter [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
GRAM_POS_ANCHORING
|
|
MMBR References
|
FEMS Microbiol Lett. 1997;147(1):147-9.
Organization of the nar genes at the chlZ locus.
Bonnefoy V, Ratouchniak J, Blasco F, Chippaux M.
(
9037773
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MALQNEKNSR YLLRDWKPEN PAFWENKGKH IARRNLWISV SCLLLAFCVW MLFSAVTVNL NKIGFNFTTD
0071 QLFLLTALPS VSGALLRVPY SFMVPIFGGR RWTVFSTAIL IIPCVWLGIA VQNPNTPFGI FIVIALLCGF
0141 AGANFASSMG NISFFFPKAK QGSALGINGG LGNLGVSVMQ LVAPLVIFVP VFAFLGVNGV PQADGSVMSL
0211 ANAAWIWVPL LAIATIAAWS GMNDIASSRA SIADQLPVLQ RLHLWLLSLL YLATFGSFIG FSAGFAMLAK
0281 TQFPDVNILR LAFFGPFIGA IARSVGGAIS DKFGGVRVTL INFIFMAIFS ALLFLTLPGT GSGNFIAFYA
0351 VFMGLFLTAG LGSGSTFQMI AVIFRQITIY RVKMKGGSDE QAHKEAVTET AAALGFISAI GAVGGFFIPQ
0421 AFGMSLNMTG SPVGAMKVFL IFYIVCVLLT WLVYGRRKFS QK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cacttcaccc aattcatcct taattctaat
-070 aactggctat tgcgccttac ctcgtgtttt gtcttttttt cattaccaat gtgtgcatgt gaggaacaat
0001 atggcactgc aaaatgagaa aaatagtcgt tatcttttgc gcgactggaa accagaaaat ccggccttct
0071 gggaaaataa aggaaaacat attgctcgaa gaaatctctg gatatcagtc agttgtctac ttcttgcctt
0141 ctgtgtctgg atgctattta gcgcagttac cgttaatctc aataaaatcg gttttaattt tactaccgat
0211 caactctttt tattaaccgc attaccctcc gtttctggcg cattattgcg tgttccctac tcctttatgg
0281 tgcctatatt cggtggacgc cgatggacgg tttttagtac tgcaatcctg attattcctt gcgtctggct
0351 cggaattgcc gtgcaaaatc cgaatactcc ttttgggata tttatcgtta tcgctttgct atgcggtttt
0421 gcaggtgcaa actttgcttc gagcatgggc aatatcagtt tcttctttcc aaaagccaaa caagggagcg
0491 ctcttgggat taatggcgga ttaggaaact taggtgtaag tgtaatgcag ctggttgcac cgctggtcat
0561 ttttgtacct gtatttgcct ttctcggcgt caatggcgta ccgcaggccg acggttcggt gatgtcgctg
0631 gcgaatgccg catggatttg ggtaccgcta ctggcgattg ccacgatcgc cgcatggtca gggatgaatg
0701 atatcgccag ttcacgcgcc tcaattgccg accagctccc tgtcttacaa cgcctgcatc tctggctgct
0771 gagcctgctt taccttgcca ccttcggttc gtttatcggt ttttctgcgg gttttgccat gctggcaaaa
0841 acccagttcc cggatgtgaa tattctgcgc ctggcgttct ttggcccatt tatcggtgcc atcgcgcggt
0911 cggttggtgg tgctatttcc gataagttcg gcggcgtgcg ggtgacgttg atcaacttta tttttatggc
0981 gattttcagt gccctgctgt tccttacctt accgggcaca ggctccggta atttcatcgc cttttacgcc
1051 gtatttatgg ggctgtttct gactgcgggt ctgggaagtg gttctacttt ccagatgatc gccgtcatct
1121 ttcgccagat aaccatttat cgggtaaaga tgaaaggcgg tagtgatgag caagctcata aagaagccgt
1191 caccgaaacg gcggcggctc tgggctttat ctcagccatt ggcgcagtgg gcggcttttt tattccgcag
1261 gcgtttggca tgtcgctcaa tatgaccggc tctccggtcg gcgcgatgaa agtgttttta atcttctaca
1331 tcgtttgtgt gctgctgacc tggctggttt atggtcggcg gaagttcagc caaaaataag agatcgatgc
1401 ctgatgtaca accgtgtcgc atccgacaag gcatcagatc ccaattcatt cctggagcag gagtcatgtc
1471 atgagtaaac ttttggatc
|
