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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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OCL89
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
nemR
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Related strains
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Strains Search
|
Search strains by gene name:
nemR
Search strains by all related name:
nemR b1649 ECK1645 JW5874 o199 o199b ydhM
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General information (Go to Linear View: )
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Gene Name
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nemR
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Alternative name
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b1649,ECK1645,JW5874,o199,o199b,ydhM
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Location, Length
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1,724,047 - 1,724,646
(
+
)
;
37.16
min
;
600
(bp) ,
199
(aa)
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Product
|
transcriptional repressor for the nem operon, NEM-inactivated
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Operon Name
|
nemRA
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Note
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GO_process: GO:0006355 - regulation of transcription, DNA-dependent
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Function
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Gene Ontology
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GO:0003677
;
DNA binding ( ydhM )
GO:0003700
;
transcription factor activity ( ydhM )
GO:0005515
;
protein binding ( ydhM )
GO:0006350
;
transcription ( ydhM )
GO:0006355
;
regulation of transcription, DNA-dependent ( ydhM )
GO:0030528
;
transcription regulator activity ( ydhM )
GO:0045449
;
regulation of transcription ( ydhM )
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PID
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145693141
|
EC number
(KEGG Pathway)
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|
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
YDHM_ECOLI
(
P76189
)
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- Protein name
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Putative HTH-type transcriptional regulator ydhM.
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- Synonyms
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- Gene name
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Name=ydhM; OrderedLocusNames=b1649, c2042;
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| Sequences |
Amino acid
FASTA format
|
0001 MNKHTEHDTR EHLLATGEQL CLQRGFTGMG LSELLKTAEV PKGSFYHYFR SKEAFGVAML ERHYAAYHQR
0071 LTELLQSGEG NYRDRILAYY QQTLNQFCQH GTISGCLTVK LSAEVCDLSE DMRSAMDKGA RGVIALLSQA
0141 LENGRENHCL TFCGEPLQQA QVLYALWLGA NLQAKISRSF EPLENALAHV KNIIATPAV
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGCCCTCCTC AGATAAGATT ATTACCATTA
-070 TTGAAGCTGT TAATGTCCAA AGTAGCAACT TTGCTTGCAC TAGACCGACT GGTCTACTAC ACTCCAACGC
0001 atgaacaaac acaccgaaca tgatactcgc gaacatctcc tggcgacggg cgagcaactt tgcctgcaac
0071 gtggattcac cgggatgggg ctaagcgaat tactaaaaac cgctgaagtg ccgaaagggt ccttctatca
0141 ctactttcgc tctaaagaag cgtttggcgt tgccatgctt gagcgtcatt acgccgcata tcaccagcga
0211 ctgactgagt tgctgcaatc cggcgaaggt aactaccgcg accgcatact ggcttattac cagcaaacac
0281 tgaaccagtt ttgccaacat ggaaccatca gtggttgcct gacagtaaaa ctctctgccg aagtgtgcga
0351 tctgtcagaa gatatgcgca gcgcgatgga taaaggtgct cgcggcgtga tcgccctgct ctctcaggcg
0421 ctggaaaatg gccgtgagaa ccattgttta accttttgtg gcgaaccgct gcaacaggca caagtgcttt
0491 acgcactgtg gcttggcgcg aatctgcagg ccaaaatttc gcgcagtttc gagccactgg aaaacgcgct
0561 ggcccatgta aaaaacatta ttgcgacgcc tgccgtttag CAGGCATTTT TTATCACCAG ACGACCGGGA
0631 GCCTTTATGT CATCTGAAAA ACTGTATTCC CCACTGAAAG TGGGCGCGAT CACGGCGGCA AACCGTATTT
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