|
PEC Original Annotations
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|
Essentiality
|
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Class
|
non-essential
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|
References (PMID)
|
|
|
Deletion
|
OCR36
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yafE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yafE
Search strains by all related name:
yafE b0210 ECK0210 JW0200
|
General information (Go to Linear View: )
|
|
Gene Name
|
yafE
|
|
Alternative name
|
b0210,ECK0210,JW0200
|
|
Location, Length
|
231,926 - 232,549
(
+
)
;
5.00
min
;
624
(bp) ,
207
(aa)
|
|
Product
|
putative S-adenosyl-L-methionine-dependent methyltransferase
|
|
Operon Name
|
yafDE
|
|
Note
|
putative biotin synthesis protein; GO_process: GO:0009102 - biotin biosynthetic process
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0008152
;
metabolic process ( yafE )
GO:0008168
;
methyltransferase activity ( yafE )
|
|
PID
|
1786404
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAFE_ECOLI
(
P30866
)
|
|
- Protein name
|
Hypothetical protein yafE.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yafE; OrderedLocusNames=b0210;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yafE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Hypothetical Protein (Bh2331) From Bacillus Halodurans At 1.95 A Resolution
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yafE
|
|
PSI-BLAST
|
Dimethyladenosine transferase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted S-adenosyl-L-methionine-dependent methyltransferase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MSGLPQGRPT FGAAQNVSAV VAYDLSAHML DVVAQAAEAR QLKNITTRQG YAESLPFADN AFDIVISRYS
0071 AHHWHDVGAA LREVNRILKP GGRLIVMDVM SPGHPVRDIW LQTVEALRDT SHVRNYASGE WLTLINEANL
0141 IVDNLITDKL PLEFSSWVAR MRTPEALVDA IRIYQQSAST EVRTYFALQN DGFFTSDIIM VDAHKAA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGGTCTGAAC GTCAGTGAAG CTTCTGTACT
-070 GGTTACGCGC GCTTCCGATC ACAATCCGCT ACTCGTTGAA TTCAGTCCCG GCAAGCCTGA TAAATAAGGT
0001 atgtcaggtc tgccacaggg cagaccaacg tttggcgctg cgcaaaacgt gagcgcggtg gtggcgtatg
0071 acttatctgc ccacatgctg gatgtcgtgg cacaagctgc cgaagcccgg caactgaaaa atatcaccac
0141 ccgccaggga tatgccgaaa gtctgccatt tgccgataac gcatttgata ttgttatcag ccgttattct
0211 gcccatcact ggcatgatgt tggtgcagca ctgcgagaag tgaataggat attgaaacct ggcggtaggc
0281 tgattgtgat ggacgtaatg tctccgggtc acccagtgcg cgacatctgg ttacagacgg tagaagcatt
0351 acgcgatacc tctcacgtac gaaactacgc cagcggtgag tggttgacgt taatcaatga agccaatctg
0421 atagttgata atttaattac agataagtta ccgctggaat tttcttcatg ggtcgcgaga atgcgtacgc
0491 cagaagcgtt agtagacgct attcgcattt accaacagag cgcatcgaca gaggtgagaa cgtattttgc
0561 cttgcagaat gatggctttt tcaccagtga tatcatcatg gtagatgcac ataaagcggc ataaATAAAA
0631 AAGGCACCGG GGGAATCGGT GCCTTTTTAT TATCTGGTTT GTCAGGAATC TGGCATGTTG TTGTTTTTCA
0701 CAAACAACGT CAGCTTATCG CCTG
|
