|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(lpcA-proB)70
,
OCR36,37-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yafQ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yafQ
Search strains by all related name:
yafQ b0225 ECK0226 JW0215
|
General information (Go to Linear View: )
|
|
Gene Name
|
yafQ
|
|
Alternative name
|
b0225,ECK0226,JW0215
|
|
Location, Length
|
245,961 - 246,239
(
-
)
;
5.30
min
;
279
(bp) ,
92
(aa)
|
|
Product
|
translation inhibitor toxin of toxin-antitoxinpair YafQ/DinJ
|
|
Operon Name
|
dinJ-yafQ
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005515
;
protein binding ( yafQ )
|
|
PID
|
1786419
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAFQ_ECOLI
(
Q47149
)
|
|
- Protein name
|
Hypothetical protein yafQ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yafQ; OrderedLocusNames=b0225;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yafQ
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Solution Structure Of The Conserved Hypothtical Protein Hp0894 From Helicobacter Pylori
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yafQ
|
|
PSI-BLAST
|
Hypothetical protein yafQ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted toxin of the YafQ-DinJ toxin-antitoxin system [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MIQRDIEYSG QYSKDVKLAQ KRHKDMNKLK YLMTLLINNT LPLPAVYKDH PLQGSWKGYR DAHVEPDWIL
0071 IYKLTDKLLR FERTGTHAAL FG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atcaattaac cattcaatca atcaaaaaca
-070 gcgaagctgg cattgatgtt cataaggcca aagacgccga tgatttattt gataaattag gaatttaaat
0001 atgattcaaa gggatattga atactcggga caatattcaa aggatgtaaa acttgcacaa aagcgtcata
0071 aggatatgaa taaattgaaa tatcttatga cgcttcttat caataatact ttaccgcttc cagctgttta
0141 taaagaccac ccgctgcaag gttcatggaa aggttatcgc gatgctcatg tcgaaccgga ctggatcctg
0211 atttacaaac ttaccgataa acttttacga tttgagagaa ctggaactca cgcggcgctc tttgggtaaa
0281 gcccgcttcc gatgaaattt gtaaaccctg cgccgacagg cttgcgtaaa actcttttgg tgataatgtg
0351 agccttccaa atccagacta ttccgattt
|
