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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
ppdel-5
(LD)
,
OCL44
(D)
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Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
kduI
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Related strains
|
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Strains Search
|
Search strains by gene name:
kduI
Search strains by all related name:
kduI b2843 ECK2841 f278c JW2811 yqeE
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General information (Go to Linear View: )
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Gene Name
|
kduI
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Alternative name
|
b2843,ECK2841,f278c,JW2811,yqeE
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Location, Length
|
2,981,310 - 2,982,146
(
-
)
;
64.26
min
;
837
(bp) ,
278
(aa)
|
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Product
|
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
|
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Operon Name
|
kduI
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Note
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homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase; GO_process: GO:0016052 - carbohydrate catabolic process
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Function
|
enzyme; Degradation of small molecules: Carbon compounds
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Gene Ontology
|
GO:0008697
;
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity ( kduI )
GO:0016853
;
isomerase activity ( kduI )
GO:0045490
;
pectin catabolic process ( kduI )
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PID
|
1789209
|
EC number
(KEGG Pathway)
|
|
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
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EcoGene
|
kduI
(
EG13096
)
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Number of removed
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0 aa cleaved
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SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
KDUI_ECOLI
(
Q46938
)
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- Protein name
|
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
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- Synonyms
|
EC 5.3.1.17, 5- keto-4-deoxyuronate isomerase, DKI isomerase
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- Gene name
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Name=kduI; OrderedLocusNames=b2843;
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| Sequences |
Amino acid
FASTA format
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0001 MDVRQSIHSA HAKTLDTQGL RNEFLVEKVF VADEYTMVYS HIDRIIVGGI MPITKTVSVG GEVGKQLGVS
0071 YFLERRELGV INIGGAGTIT VDGQCYEIGH RDALYVGKGA KEVVFASIDT GTPAKFYYNC APAHTTYPTK
0141 KVTPDEVSPV TLGDNLTSNR RTINKYFVPD VLETCQLSMG LTELAPGNLW NTMPCHTHER RMEVYFYFNM
0211 DDDACVFHMM GQPQETRHIV MHNEQAVISP SWSIHSGVGT KAYTFIWGMV GENQVFDDMD HVAVKDLR
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aaccctagcc catgggcata tcatcccttt
-070 atagagaaaa cgaaacagtg tttcactatc gttttctatt ttcacgcttc actgattatc ggaggttgat
0001 gtggacgtaa gacagagcat ccacagtgcg cacgcaaaaa cgctggatac ccaagggctg cgcaatgaat
0071 ttttggttga aaaggtattt gtcgccgatg agtacaccat ggtttacagc cacattgacc gaattattgt
0141 tggcggcatt atgccgataa ctaaaacggt ttccgttggc ggggaagttg gtaaacaact cggcgtaagc
0211 tatttccttg aacgtcgcga gttaggtgtt atcaatattg gcggtgccgg tacgattact gtcgatggcc
0281 aatgctatga aatcggtcac cgcgacgccc tgtatgttgg taaaggtgca aaagaagttg tctttgccag
0351 tattgatacc ggcactccgg cgaagtttta ttacaattgc gcacccgcgc atacgacgta tcccaccaaa
0421 aaagtcacac cggacgaagt atctccagtc acgttaggcg ataacctcac cagtaaccgt cgcacgatta
0491 acaaatattt tgtcccggat gtactggaaa cctgccaatt gagtatgggg ctgacggagc tggctccggg
0561 taacttgtgg aacaccatgc cgtgtcacac ccacgagcgc cggatggaag tttatttcta tttcaatatg
0631 gatgatgacg cctgcgtttt ccacatgatg gggcagccgc aagaaacgcg tcatattgtg atgcataacg
0701 agcaggcggt gatctccccg agctggtcga tccattccgg tgtcggaacc aaagcttata cctttatctg
0771 gggcatggtc ggtgaaaacc aggtctttga tgatatggac catgtggccg ttaaagattt gcgctagttg
0841 tgggcataaa cgaataaggt attgttatga ttttaagtgc attttctctc gaaggtaaag ttgcggtcgt
0911 cactggttgt gatactggac tgggtca
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