PEC Original Annotations
|
Essentiality
|
Class
|
essential
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
Deletion
|
OCL35
(D)
,
OCL35-12
(D)
,
OCL35-13
(D)
|
Related gene (W3110 PEC)
|
Gene Search
|
Search MG1655 PEC by gene name:
cca
|
Related strains
|
Strains Search
|
Search strains by gene name:
cca
Search strains by all related name:
cca b3056 ECK3046 JW3028
|
General information (Go to Linear View:)
|
Gene Name
|
cca
|
Alternative name
|
b3056,ECK3046,JW3028
|
Location, Length
|
3,199,913 - 3,201,151
(
+
)
;
68.97
min
;
1239
(bp) ,
412
(aa)
|
Product
|
fused tRNA nucleotidyl transferase/2'3'-cyclicphosphodiesterase/2'nucleotidase and phosphatase
|
Operon Name
|
ygiM-cca
|
Note
|
tRNA nucleotidyl transferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification
|
Function
|
enzyme; Aminoacyl tRNA synthetases, tRNA modification
|
Gene Ontology
|
GO:0000049
;
tRNA binding ( cca )
GO:0000166
;
nucleotide binding ( cca )
GO:0000287
;
magnesium ion binding ( cca )
GO:0001680
;
tRNA 3'-terminal CCA addition ( cca )
GO:0003723
;
RNA binding ( cca )
GO:0003824
;
catalytic activity ( cca )
GO:0004112
;
cyclic-nucleotide phosphodiesterase activity ( cca )
GO:0004810
;
tRNA adenylyltransferase activity ( cca )
GO:0005515
;
protein binding ( cca )
GO:0005524
;
ATP binding ( cca )
GO:0006396
;
RNA processing ( cca )
GO:0008033
;
tRNA processing ( cca )
GO:0016151
;
nickel ion binding ( cca )
GO:0016437
;
tRNA cytidylyltransferase activity ( cca )
GO:0016740
;
transferase activity ( cca )
GO:0016779
;
nucleotidyltransferase activity ( cca )
GO:0016787
;
hydrolase activity ( cca )
GO:0016791
;
phosphoric monoester hydrolase activity ( cca )
GO:0042245
;
RNA repair ( cca )
GO:0046872
;
metal ion binding ( cca )
|
PID
|
1789436
|
EC number
(KEGG Pathway)
|
2.7.7.72
3.1.4.16
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
CCA_ECOLI
(
P06961
)
|
- Protein name
|
tRNA nucleotidyltransferase
|
- Synonyms
|
EC 2.7.7.25, tRNA adenylyltransferase, tRNA CCA-pyrophosphorylase, CCA-adding enzyme
|
- Gene name
|
Name=cca; OrderedLocusNames=b3056;
|
MMBR References
|
J Biol Chem. 1986;261:6444-6449
Cloning, sequencing, and species relatedness of the Escherichia coli cca gene encoding the enzyme tRNA nucleotidyltransferase.
Cudny, H. J., J. R. Lupski, G. N. Godson, and M. P. Deutscher.
|
Sequences |
Amino acid
FASTA format
|
0001 MKIYLVGGAV RDALLGLPVK DRDWVVVGST PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL ARTERKSGSG
0071 YTGFTCYAAP DVTLEDDLKR RDLTINALAQ DDNGEIIDPY NGLGDLQNRL LRHVSPAFGE DPLRVLRVAR
0141 FAARYAHLGF RIADETLALM REMTHAGELE HLTPERVWKE TESALTTRNP QVFFQVLRDC GALRVLFPEI
0211 DALFGVPAPA KWHPEIDTGI HTLMTLSMAA MLSPQVDVRF ATLCHDLGKG LTPPELWPRH HGHGPAGVKL
0281 VEQLCQRLRV PNEIRDLARL VAEFHDLIHT FPMLNPKTIV KLFDSIDAWR KPQRVEQLAL TSEADVRGRT
0351 GFESADYPQG RWLREAWEVA QSVPTKAVVE AGFKGVEIRE ELTRRRIAAV ASWKEQRCPK PE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCCAAGCCGC AAACGCAAAG ATCGCTGGAT
-070 GAACTAAATC GCCTTCTTCG TTGCACTGTC TTATTATTAG GAATTGTGTA TTTGACGAAG GGATGATGGC
0001 gtgaagattt atctggtcgg tggtgctgtt cgggatgcat tgttagggct accggtcaaa gacagagatt
0071 gggtggtggt cggcagtacg ccacaggaga tgctcgacgc gggctaccag caggtaggcc gcgattttcc
0141 tgtgtttctg catccgcaaa cgcatgaaga gtatgcgctg gcacgtaccg aacggaaatc cggttccggt
0211 tacaccggtt ttacttgcta tgccgcaccg gatgtcacgc tggaagatga tcttaagcgt cgcgatctga
0281 ccattaatgc gctggcccag gacgataacg gcgagattat cgacccgtac aacggtctgg gcgatctgca
0351 aaatcgtctg ttgcgccatg tttcccccgc ttttggcgaa gatccgttac gcgtattgcg cgtggcgcgt
0421 tttgctgcgc gttatgccca cctcggtttt cgtattgccg atgaaactct ggcgttgatg cgcgagatga
0491 cccatgcggg tgaactggaa cacctgacgc ctgaacgggt atggaaagag acggaaagcg ccctcaccac
0561 ccgcaatcca caggtgttct tccaggtact gcgcgattgc ggcgcactgc gcgttttatt cccggaaatt
0631 gacgcactgt ttggcgttcc ggcccctgcc aagtggcatc cggaaatcga tacgggtatt cataccttaa
0701 tgacgctctc aatggcggcg atgctgagtc cgcaggtcga tgtccgtttc gcaactttat gccacgatct
0771 cggtaaaggg ctgacgccgc cagaactctg gccgcgtcat catggtcatg gcccggcggg tgttaagtta
0841 gtggaacaac tatgccagcg tctgcgcgtg ccaaatgaaa ttcgcgattt agccagactg gtggctgagt
0911 ttcacgatct catccacacc ttcccaatgc tgaacccaaa aaccatcgtc aaattatttg attccatcga
0981 tgcctggcgt aaaccgcagc gtgtcgagca actggcgctg accagcgagg ctgacgtgcg cggcagaacc
1051 ggttttgaat cagcggacta cccgcaaggc cgctggttgc gcgaagcctg ggaagtggcg cagtcagtgc
1121 cgacaaaagc cgtcgttgaa gcgggattta aaggtgtgga gattcgcgag gagctgaccc gacggcggat
1191 tgcggcggta gccagctgga aggaacaacg ttgcccaaag cctgaatgaG TATTGGGCAT TTTGCCGGAT
1261 GCGGCGTAAA CGCCTTATCC GGCTACATGT CAACGACAGT TGTAGGCCTG ATAAGACGCG CAAGCGTCGC
1331 ATCAGGCGT
|