|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL25,26-1
(D)
,
OCL26
(D)
,
OCL26-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
aaeX
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
aaeX
Search strains by all related name:
aaeX b3242 ECK3231 f90 JW5541 yhcR
|
General information (Go to Linear View: )
|
|
Gene Name
|
aaeX
|
|
Alternative name
|
b3242,ECK3231,f90,JW5541,yhcR
|
|
Location, Length
|
3,387,156 - 3,387,359
(
-
)
;
73.00
min
;
204
(bp) ,
67
(aa)
|
|
Product
|
membrane protein of efflux system
|
|
Operon Name
|
aaeXAB
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( aaeX )
GO:0016020
;
membrane ( aaeX )
GO:0016021
;
integral to membrane ( aaeX )
|
|
PID
|
87082234
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHCR_ECOLI
(
P46478
)
|
|
- Protein name
|
Hypothetical protein yhcR.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhcR; OrderedLocusNames=b3242;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
aaeX
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein aaeX
|
|
PSI-BLAST
|
Protein aaeX
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein SSON_3384 [Shigella sonnei Ss046]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MSLFPVIVVF GLSFPPIFFE LLLSLAIFWL VRRVLVPTGI YDFVWHPALF NTALYCCLFY LISRLFV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctacagcaat gttgctctcg cccggctttc
-070 catgcccttc tctgcggcga cagatgctga aaataataac gcctgctctc tctttacaac caaggtcaac
0001 atgagtctgt ttcccgttat cgtggtgttt gggctgtcct tcccaccgat attttttgaa ttgcttttat
0071 cactggcgat tttctggctg gtgcgccggg tacttgtgcc aacaggtatc tacgactttg tctggcatcc
0141 ggcgttgttc aacaccgcgc tctattgctg cttgttttat ttgatatcgc gactgttcgt ttgaggttga
0211 agtgaaaaca ctaataagaa aattctcccg tacggccatc acggtcgtat tagtcattct ggccttcatc
0281 gcaattttta atgcctgggt ctat
|
