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PEC Original Annotations
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Essentiality
|
|
Class
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non-essential
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|
References (PMID)
|
|
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Deletion
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OCL22
(D)
,
OCL22-2
(D)
,
OCL22-6
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
chiA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
chiA
Search strains by all related name:
chiA b3338 ECK3325 f897 JW3300 yheB
|
General information (Go to Linear View: )
|
|
Gene Name
|
chiA
|
|
Alternative name
|
b3338,ECK3325,f897,JW3300,yheB
|
|
Location, Length
|
3,465,182 - 3,467,875
(
-
)
;
74.69
min
;
2694
(bp) ,
897
(aa)
|
|
Product
|
periplasmic endochitinase
|
|
Operon Name
|
chiA
|
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Note
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GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009057 - macromolecule catabolic process
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Function
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putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0000272
;
polysaccharide catabolic process ( chiA )
GO:0003796
;
lysozyme activity ( chiA )
GO:0003824
;
catalytic activity ( chiA )
GO:0004553
;
hydrolase activity, hydrolyzing O-glycosyl compounds ( chiA )
GO:0004568
;
chitinase activity ( chiA )
GO:0005576
;
extracellular region ( chiA )
GO:0005975
;
carbohydrate metabolic process ( chiA )
GO:0006032
;
chitin catabolic process ( chiA )
GO:0008061
;
chitin binding ( chiA )
GO:0008152
;
metabolic process ( chiA )
GO:0016787
;
hydrolase activity ( chiA )
GO:0016798
;
hydrolase activity, acting on glycosyl bonds ( chiA )
GO:0030246
;
carbohydrate binding ( chiA )
GO:0042597
;
periplasmic space ( chiA )
|
|
PID
|
1789736
|
EC number
(KEGG Pathway)
|
3.2.1.14
3.2.1.17
|
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SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
CHIA_ECOLI
(
P13656
)
|
|
- Protein name
|
Probable bifunctional chitinase/lysozyme precursor
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- Synonyms
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- Gene name
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Name=chiA; OrderedLocusNames=b3338;
|
| Sequences |
Amino acid
FASTA format
|
0001 MKLNIFTKSM IGMGLVCSAL PALAMEAWNN QQGGNKYQVI FDGKIYENAW WVSSTNCPGK AKANDATNPW
0071 RLKRTATAAE ISQFGNTLSC EKSGSSSSSN SNTPASNTPA NGGSATPAQG TVPSNSSVVA WNKQQGGQTW
0141 YVVFNGAVYK NAWWVASSNC PGDAKSNDAS NPWRYVRAAT ATEISETSNP QSCTSAPQPS PDVKPAPDVK
0211 PAPDVQPAPA DKSNDNYAVV AWKGQEGSST WYVIYNGGIY KNAWWVGAAN CPGDAKENDA SNPWRYVRAA
0281 TATEISQYGN PGSCSVKPDN NGGAVTPVDP TPETPVTPTP DNSEPSTPAD SVNDYSLQAW SGQEGSEIYH
0351 VIFNGNVYKN AWWVGSKDCP RGTSAENSNN PWRLERTATA AELSQYGNPT TCEIDNGGVI VADGFQASKA
0421 YSADSIVDYN DAHYKTSVDQ DAWGFVPGGD NPWKKYEPAK AWSASTVYVK GDRVVVDGQA YEALFWTQSD
0491 NPALVANQNA TGSNSRPWKP LGKAQSYSNE ELNNAPQFNP ETLYASDTLI RFNGVNYISQ SKVQKVSPSD
0561 SNPWRVFVDW TGTKERVGTP KKAWPKHVYA PYVDFTLNTI PDLAALAKNH NVNHFTLAFV VSKDANTCLP
0631 TWGTAYGMQN YAQYSKIKAL REAGGDVMLS IGGANNAPLA ASCKNVDDLM QHYYDIVDNL NLKVLDFDIE
0701 GTWVADQASI ERRNLAVKKV QDKWKSEGKD IAIWYTLPIL PTGLTPEGMN VLSDAKAKGV ELAGVNVMTM
0771 DYGNAICQSA NTEGQNIHGK CATSAIANLH SQLKGLHPNK SDAEIDAMMG TTPMVGVNDV QGEVFYLSDA
0841 RLVMQDAQKR NLGMVGIWSI ARDLPGGTNL SPEFHGLTKE QAPKYAFSEI FAPFTKQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 taatgccgta atttaattca tattgaaggg
-070 ttctcgtaaa acgtaaataa ttcctgcgta ggacttttgt tttgcagttt ttacgtcaca agggattata
0001 atgaaattaa atatatttac taaatctatg attggtatgg ggctggtgtg ttccgctctg ccagcattgg
0071 caatggaagc atggaataac caacaaggtg gtaataaata tcaggttatt ttcgatggca aaatttatga
0141 aaatgcctgg tgggtttctt ctacaaattg cccgggaaaa gcgaaagcaa atgatgcaac taacccgtgg
0211 cgtttaaagc gtaccgcaac agctgctgaa attagtcagt ttggcaatac actttcctgc gaaaagagcg
0281 gcagctcatc ttcttcaaat tcaaatacgc ctgcatccaa tacgccggct aatggcggtt cggctacacc
0351 agcacagggc actgttccgt ctaattcttc tgtagttgcc tggaataaac agcagggcgg tcagacctgg
0421 tatgtcgtct ttaatggtgc ggtatataaa aatgcctggt gggtagcctc ttctaactgt ccgggtgatg
0491 cgaaaagcaa tgatgccagc aacccatggc gttatgttcg tgccgctacg gcaacggaaa tctcagaaac
0561 cagtaatcca cagtcctgta cttcagcacc acagccttca ccggatgtga aaccggcacc ggacgttaaa
0631 ccggctcctg atgttcagcc agccccagct gataagtcaa acgacaacta tgctgtagta gcctggaaag
0701 gtcaggaagg ttcttctaca tggtacgtta tctataacgg cggcatttat aagaacgcct ggtgggtagg
0771 cgcggcaaat tgcccaggcg atgcgaaaga aaacgatgcc agtaacccat ggcgttatgt tcgcgcggca
0841 acggcaacag aaatcagcca gtatggtaac cctggctcct gttccgttaa gccggataat aatggcggtg
0911 ctgtgactcc ggttgatcca actccggaaa caccggtgac cccaactccg gataacagcg agccatcaac
0981 accagcggat agcgttaacg attactcatt gcaagcgtgg agcggccagg aaggtagcga aatttaccat
1051 gttattttca atggtaatgt ttacaagaac gcctggtggg ttgggtctaa agattgccca cggggtacca
1121 gcgctgaaaa ctccaataac ccatggcgtc tcgagcgtac agctaccgct gcggaattga gtcagtacgg
1191 taacccgact acctgtgaaa ttgataacgg cggcgtcatt gttgcggatg gtttccaggc cagcaaagcg
1261 tacagcgcgg acagcatcgt agattataac gatgcacatt ataaaacttc tgtcgatcaa gacgcatggg
1331 gctttgtccc gggcggcgat aacccgtgga agaaatacga accggcgaaa gcatggtccg catccactgt
1401 gtacgtgaaa ggtgatcgcg ttgttgttga tgggcaggct tatgaagcgc tgttctggac gcaaagtgac
1471 aaccctgctc tggtggcgaa ccaaaacgcc accggtagca atagccgccc gtggaagccg ttaggtaagg
1541 ctcagagcta tagcaacgaa gagctgaata atgcgccgca gtttaatcca gaaacgcttt atgccagcga
1611 tacgctgatt cgctttaacg gtgtgaacta catttctcag agtaaagtgc agaaagtttc tccttctgac
1681 agcaacccgt ggcgtgtttt tgttgactgg accggaacca aagagcgcgt aggtacgccg aagaaagcgt
1751 ggccgaaaca cgtttatgca ccgtatgtcg actttacgct gaatacgatc ccggatctgg ctgcgctggc
1821 taagaatcat aacgtcaacc acttcacgct ggcgtttgtg gtgagtaaag atgcgaacac ctgtctgccg
1891 acatggggta ccgcttacgg tatgcagaat tacgctcagt acagcaaaat caaagctctg cgtgaggctg
1961 gcggcgatgt gatgctgtct atcggtggtg ctaacaacgc tccgctggct gcttcctgta agaacgtaga
2031 cgatctgatg cagcattatt atgacatcgt tgataacctg aacctcaaag tcctggactt cgatatcgaa
2101 ggcacctggg ttgcggatca ggcatctatt gaacgtcgta accttgctgt gaagaaagtg caggataaat
2171 ggaagtcaga aggcaaagat attgctatct ggtacacctt gccaattctg ccgactggcc tgacgccgga
2241 agggatgaat gtcctgagcg atgccaaagc gaaaggtgtt gagctggcgg gtgtgaacgt gatgacaatg
2311 gactacggta acgcgatttg tcagtctgca aataccgaag gccagaacat tcacggtaag tgtgcaacgt
2381 ctgcgattgc caacctgcat tcacaattga aaggcctcca tcccaataag agcgatgcag aaattgacgc
2451 tatgatgggt accacgccga tggttggcgt gaacgacgtt cagggcgagg tgttctatct ctctgatgct
2521 cgtctggtca tgcaggatgc gcagaagcgt aatctcggta tggttggtat ctggtcaatc gcgcgcgacc
2591 tgccgggcgg cactaacctg tctccggaat tccacggcct gactaaagaa caggcaccga agtacgcatt
2661 tagcgaaatc ttcgcgccgt ttactaagca ataaatgtgt tggcgatacc ttccagtatc gccgcatttt
2731 ttgtcaatgg gctacttttg gtagcccatt atttttattc atatttctat tctttgctta aaaa
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