|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
2-1
(LD)
,
OCL10,16-3 (LD 2-1'_CRS)
(D)
,
OCL10,16-4 (LD 2-1'_P/O)
(D)
,
OCL13
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bcsE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bcsE
Search strains by all related name:
bcsE b3536 ECK3521 JW3504 o523 yhjS
|
General information (Go to Linear View: )
|
|
Gene Name
|
bcsE
|
|
Alternative name
|
b3536,ECK3521,JW3504,o523,yhjS
|
|
Location, Length
|
3,694,481 - 3,696,052
(
+
)
;
79.63
min
;
1572
(bp) ,
523
(aa)
|
|
Product
|
cellulose production protein
|
|
Operon Name
|
bcsEFG
|
|
Note
|
conserved hypothetical protein; Salmonella ortholog implicated in the biosynthesis of cellulose, although the precise role remains unclear
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1789958
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHJS_ECOLI
(
P37657
)
|
|
- Protein name
|
Hypothetical protein yhjS.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhjS; OrderedLocusNames=b3536;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
bcsE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yhjS
|
|
PSI-BLAST
|
Hypothetical protein yhjS
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b3536 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
TUBULIN_B_AUTOREG
|
| Sequences |
Amino acid
FASTA format
|
0001 MRDIVDPVFS IGISSLWDEL RHMPAGGVWW FNVDRHEDAI SLANQTIASQ AETAHVAVIS MDSDPAKIFQ
0071 LDDSQGPEKI KLFSMLNHEK GLYYLTRDLQ CSIDPHNYLF ILVCANNAWQ NIPAERLRSW LDKMNKWSRL
0141 NHCSLLVINP GNNNDKQFSL LLEEYRSLFG LASLRFQGDQ HLLDIAFWCN EKGVSARQQL SVQQQNGIWT
0211 LVQSEEAEIQ PRSDEKRILS NVAVLEGAPP LSEHWQLFNN NEVLFNEART AQAATVVFSL QQNAQIEPLA
0281 RSIHTLRRQR GSAMKILVRE NTASLRATDE RLLLACGANM VIPWNAPLSR CLTMIESVQG QKFSRYVPED
0351 ITTLLSMTQP LKLRGFQKWD VFCNAVNNMM NNPLLPAHGK GVLVALRPVP GIRVEQALTL CRPNRTGDIM
0421 TIGGNRLVLF LSFCRINDLD TALNHIFPLP TGDIFSNRMV WFEDDQISAE LVQMRLLAPE QWGMPLPLTQ
0491 SSKPVINAEH DGRHWRRIPE PMRLLDDAVE RSS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTAAATTGAT TCACATGCTA AATCTGATAA
-070 GTTTTAATTT CAATGGTAGG TTTATTTCTT AGCTTTCGCT AGTAAACTGA TAATCAGACA AAATGGTGAC
0001 atgagggaca ttgtggaccc tgtattctct atcggtatct catcattatg ggatgagctg cgacatatgc
0071 cagcaggcgg cgtctggtgg tttaacgtcg atcgccatga agatgctatc agtctggcga atcaaacaat
0141 tgcatcccag gctgaaaccg cacacgtcgc ggtcattagc atggacagcg atccggcgaa aatctttcaa
0211 ttagatgatt ctcaagggcc ggaaaaaata aaattatttt caatgctaaa tcatgaaaaa ggtctatact
0281 atttgacccg tgatttgcag tgttctattg atccccataa ttaccttttt attcttgttt gcgcaaataa
0351 cgcatggcaa aacattcctg ccgagcggct tcgctcatgg ttggataaaa tgaataaatg gagcaggtta
0421 aaccattgtt cgcttttggt aattaatccc ggaaataata acgataaaca attttcattg ttgcttgagg
0491 aataccgttc actttttggt cttgccagtt tgcgttttca gggtgaccaa catttgctgg atattgcctt
0561 ctggtgcaac gaaaaagggg tcagcgcccg tcagcagctt agcgttcagc aacaaaatgg tatctggaca
0631 ttagttcaaa gcgaagaggc ggagatccaa ccacgcagcg acgaaaaacg cattctgagt aatgttgctg
0701 tactggaagg tgcgccgccg ctatcggaac actggcaact gttcaacaat aacgaagtcc tgttcaatga
0771 agcccgtacc gctcaggcgg cgacggtggt cttttcttta cagcaaaatg cgcaaatcga gccactggcc
0841 cgcagcattc ataccctgcg tcgccagcgc ggtagtgcga tgaaaatcct cgtgcgggaa aataccgcta
0911 gcctgcgcgc caccgatgaa cgtttgttat tggcctgcgg tgcaaatatg gttattccgt ggaatgcgcc
0981 actctcccgt tgtctgacga tgatcgaaag cgtgcaaggg cagaagttta gtcgctatgt gccggaagat
1051 atcactacct tgctgtcaat gacccagccg ctcaaactgc gtggtttcca gaagtgggat gtgttctgta
1121 atgccgtcaa caacatgatg aataaccctc tattacctgc ccacggtaaa ggcgttctgg ttgccctacg
1191 tccggtaccg ggtatccgcg ttgaacaagc cctgacgctg tgtcgcccta accgtaccgg cgatatcatg
1261 accattggcg gtaatcggct ggtgctgttt ctctcattct gtcggattaa cgatctggat accgcgttga
1331 atcatatttt cccattgcct actggcgaca ttttctcaaa ccgtatggtc tggtttgaag atgatcaaat
1401 cagtgccgag ctggtgcaga tgcgcttgct tgccccagaa caatggggca tgccgctgcc tttaacgcaa
1471 agttctaaac cggtcatcaa tgccgagcac gatggtcgcc actggcgacg aataccagaa cccatgcgac
1541 tgttagatga tgctgtggag cgctcatcat gaTGACCATC AGCGATATCA TTGAAATTAT TGTCGTTTGC
1611 GCACTGATAT TTTTCCCGCT GGGCTATCTG GCGCGGCACT CTTTGCGACG CATTCGCGAC AC
|
