|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL03
(D)
,
DE(OC2)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cbrB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cbrB
Search strains by all related name:
cbrB b3716 ECK3709 JW3694 o155 yieI
|
General information (Go to Linear View: )
|
|
Gene Name
|
cbrB
|
|
Alternative name
|
b3716,ECK3709,JW3694,o155,yieI
|
|
Location, Length
|
3,895,529 - 3,895,996
(
+
)
;
83.96
min
;
468
(bp) ,
155
(aa)
|
|
Product
|
inner membrane protein, creBC regulon
|
|
Operon Name
|
cbrBC
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yieI )
GO:0016020
;
membrane ( yieI )
GO:0016021
;
integral to membrane ( yieI )
|
|
PID
|
1790152
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YIEI_ECOLI
(
P31468
)
|
|
- Protein name
|
Hypothetical protein yieI.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yieI; OrderedLocusNames=b3716;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yieI
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Inner membrane protein yieI
|
|
PSI-BLAST
|
Inner membrane protein yieI
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted inner membrane protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MSVSRRVIHH GLYFAVLGPL IGVLFLVLYI FFAKEPLVLW VIIHPIFLLL SITTGAIPAL LTGVMVACLP
0071 EKIGSQKRYR CLAGGIGGVV ITEIYCAVIV HIKGMASSEL FENILSGDSL VVRIIPALLA GVVMSRIITR
0141 LPGLDISCPE TDSLS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTGGAAAGCG CGTGGTTGGG ATATTACGGC
-070 ATAGTTCTTC ACACTCCCTT CACTTACCCC GCTTAAATTG GCGCTCAAAG GTAAGTAAAG GGAGTTTGAT
0001 atgtctgttt cacgtcgggt aatacatcac ggactttatt ttgcagtttt aggaccgtta attggtgttc
0071 tgtttcttgt cctctacata ttcttcgcaa aagaaccgct ggttctttgg gtgataatac atccaatttt
0141 tctcttattg tcgataacta cgggagctat tcctgcgttg ttaaccggtg taatggttgc ctgtctgccg
0211 gaaaagatcg ggtcacagaa acgttatcgt tgtctggctg gtggcatagg tggcgtcgtt atcaccgaga
0281 tctattgtgc agttattgta catattaagg gcatggcttc ctcggagttg tttgaaaaca ttctttctgg
0351 tgacagtctc gttgtccgca tcattcctgc attgctggca ggtgtggtga tgagcagaat cattacccgt
0421 ctacccggat tggatatttc atgtcctgaa acagactctt taagttaaGC GGGATACTTT ATCTTTGGGC
0491 TACTCAAAAG CAGACAGGAT GTTTCTATGA CTCAAAATAT CAGGCCGTTA CCCCAATTCA AATATCATCC
0561 CAAGCCAC
|
