|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL03
(D)
,
DE(OC2)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cbrC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cbrC
Search strains by all related name:
cbrC b3717 ECK3710 JW3695 o195 yieJ
|
General information (Go to Linear View: )
|
|
Gene Name
|
cbrC
|
|
Alternative name
|
b3717,ECK3710,JW3695,o195,yieJ
|
|
Location, Length
|
3,896,045 - 3,896,632
(
+
)
;
83.97
min
;
588
(bp) ,
195
(aa)
|
|
Product
|
conserved protein, UPF0167 family
|
|
Operon Name
|
cbrBC
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1790153
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIEJ_ECOLI
(
P31469
)
|
|
- Protein name
|
Hypothetical UPF0167 protein yieJ.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yieJ; OrderedLocusNames=b3717;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
cbrC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0167 protein yieJ
|
|
PSI-BLAST
|
UPF0167 protein yieJ
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b3717 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MTQNIRPLPQ FKYHPKPLET GAFEQDKTVE CDCCEQQTSV YYSGPFYCVD EVEHLCPWCI ADGSAAEKFA
0071 GSFQDDASIE GVEFEYDEED EFAGIKNTYP DEMLKELVER TPGYHGWQQE FWLAHCGDFC VFIGYVGWND
0141 IKDRLDEFAN LEEDCENFGI RNSDLAKCLQ KGGHCQGYLF RCLHCGKLRL WGDFS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CCGTCTACCC GGATTGGATA TTTCATGTCC
-070 TGAAACAGAC TCTTTAAGTT AAGCGGGATA CTTTATCTTT GGGCTACTCA AAAGCAGACA GGATGTTTCT
0001 atgactcaaa atatcaggcc gttaccccaa ttcaaatatc atcccaagcc actggaaaca ggcgcatttg
0071 aacaggataa aaccgtagag tgcgattgct gtgaacaaca gacgtcagtt tattactcgg gtccctttta
0141 ttgcgttgat gaagttgaac atctctgtcc gtggtgtatt gcggacggtt ctgctgctga aaagtttgca
0211 ggtagttttc aggatgatgc cagcatagaa ggtgttgaat ttgagtatga tgaagaggac gaatttgccg
0281 gtattaagaa cacatatcct gatgaaatgc tgaaagagtt ggttgaacgc acgccaggtt atcatggatg
0351 gcagcaggaa ttctggctcg cgcattgtgg cgatttctgt gtttttatcg gctatgtggg ctggaatgat
0421 ataaaagatc gcctcgatga atttgccaac cttgaagaag attgtgagaa tttcggtatt agaaattctg
0491 atctagctaa atgcctgcaa aagggtggtc attgtcaggg ttatctcttc cgctgtctcc actgcggcaa
0561 gctgagactg tggggtgatt tttcgtagTT ATTTAAATAA TGAGAACAGG CCGGAGCGTA ATTCACACAT
0631 CCGGCCTTAT TTCTTAAGCT TAACCGAGTG CTAATTCTGC GGCAGCGGCT TTATCAGC
|
