|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR38
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaiC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaiC
Search strains by all related name:
yaiC adrA b0385 ECK0380 JW0376 yaiC
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaiC
|
|
Alternative name
|
adrA,b0385,ECK0380,JW0376,yaiC
|
|
Location, Length
|
402,927 - 404,042
(
+
)
;
8.68
min
;
1116
(bp) ,
371
(aa)
|
|
Product
|
diguanylate cyclase, cellulose regualtor
|
|
Operon Name
|
adrA
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( adrA )
GO:0016020
;
membrane ( adrA )
GO:0016021
;
integral to membrane ( adrA )
|
|
PID
|
1786584
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YAIC_ECOLI
(
P21830
;
P77719
)
|
|
- Protein name
|
Hypothetical protein yaiC.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaiC; OrderedLocusNames=b0385, c0492;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaiC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Response Regulator Pled In Complex With C-Digmp
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaiC
|
|
PSI-BLAST
|
Hypothetical protein yaiC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted diguanylate cyclase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MFPKIMNDEN FFKKAAAHGE EPPLTPQNEH QRSGLRFARR VRLPRAVGLA GMFLPIASTL VSHPPPGWWW
0071 LVLVGWAFVW PHLAWQIASR AVDPLSREIY NLKTDAVLAG MWVGVMGVNV LPSTAMLMIM CLNLMGAGGP
0141 RLFVAGLVLM VVSCLVTLEL TGITVSFNSA PLEWWLSLPI IVIYPLLFGW VSYQTATKLA EHKRRLQVMS
0211 TRDGMTGVYN RRHWETMLRN EFDNCRRHNR DATLLIIDID HFKSINDTWG HDVGDEAIVA LTRQLQITLR
0281 GSDVIGRFGG DEFAVIMSGT PAESAITAML RVHEGLNTLR LPNTPQVTLR ISVGVAPLNP QMSHYREWLK
0351 SADLALYKAK KAGRNRTEVA A
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACCTGATAGT GCTAACGGGT GAGCTACGAA
-070 AATGGCTCAC CCGAAATATC ATACTTCTGC CTTTAGCTCC GTCTCTATAA TTTGGGAAAA TTGTTTCTGA
0001 atgttcccaa aaataatgaa tgatgaaaac tttttcaaaa aagcggcggc gcacggggag gaacctcctt
0071 taactcctca aaacgaacat cagcggtccg ggctgcgctt cgcccgtcgc gtcagactac cccgtgcggt
0141 tggcctggct ggcatgttct taccgattgc ttcaacgctg gtttcacacc cgccgccggg ctggtggtgg
0211 ctggtgttgg tcggctgggc gttcgtctgg ccgcatttag cctggcagat agcgagcagg gccgtcgatc
0281 cgcttagccg ggaaatttac aacttaaaaa ccgatgcagt attagcggga atgtgggtag gcgtaatggg
0351 cgtaaacgtg ctgccttcca ccgcgatgtt gatgattatg tgtctgaatt tgatgggggc aggcggcccc
0421 cgtctgtttg tcgcgggtct ggtgttgatg gtggtttcct gccttgtcac cctcgagctg acgggcatta
0491 ccgtgtcgtt caatagtgcg ccgctggaat ggtggctctc ccttcccatt attgtcattt atcctctgct
0561 gtttggctgg gtcagctacc agacggcaac caaactggcg gaacataaac gcaggttgca ggtcatgagt
0631 acccgcgacg gcatgacggg cgtgtataac cgacgtcatt gggaaactat gttacgcaat gaatttgata
0701 actgtcggcg gcataatcgc gatgcaacgt tactgattat cgatatcgac catttcaaga gcatcaacga
0771 tacctggggc catgatgtgg gcgatgaagc gattgtggcg cttacccgac agttacaaat taccctgcgc
0841 ggtagcgatg tgattggtcg gtttggcggc gatgagtttg cagtaatcat gtccggtacg ccagctgaga
0911 gcgccattac cgccatgtta cgggtgcatg aagggctaaa tacattacgt ttgccgaata cgccacaggt
0981 aactttacgg attagtgtgg gggttgcgcc gctgaaccca caaatgagtc actatcgtga gtggttgaaa
1051 tcggcagatt tggcgcttta caaagcaaag aaagccggac gtaaccgcac cgaagtggcg gcctgaCGTC
1121 CGGCGAAAGT CATCAGGATT TGCTGAGTTT TTCTGATTTT TCCATACACT TCGTCATCGC TTCGATCACT
1191 GCAGCACGGA AGCCTTTCTC TTCCAG
|
