|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
1
(LD)
,
OCR20,24-1 (LD 1-1_CRS)
(D)
,
OCR20,24-2 (LD 1-1_P/O)
(D)
,
OCR23
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
kptA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
kptA
Search strains by all related name:
kptA b4331 ECK4322 JW5784 o218 yjiI
|
General information (Go to Linear View: )
|
|
Gene Name
|
kptA
|
|
Alternative name
|
b4331,ECK4322,JW5784,o218,yjiI
|
|
Location, Length
|
4,558,953 - 4,559,507
(
+
)
;
98.26
min
;
555
(bp) ,
184
(aa)
|
|
Product
|
RNA 2'-phosphotransferase
|
|
Operon Name
|
kptA
|
|
Note
|
GO_component: GO:0005737 - cytoplasm
|
|
Function
|
|
|
Gene Ontology
|
GO:0006388
;
tRNA splicing ( kptA )
GO:0016740
;
transferase activity ( kptA )
GO:0016772
;
transferase activity, transferring phosphorus-containing groups ( kptA )
|
|
PID
|
87082424
|
EC number
(KEGG Pathway)
|
2.7.-.-
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
KPTA_ECOLI
(
P39380
)
|
|
- Protein name
|
RNA 2'-phosphotransferase
|
|
- Synonyms
|
EC 2.7.-.-
|
|
- Gene name
|
Name=kptA; OrderedLocusNames=b4331;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
kptA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of Ape0204 From Aeropyrum Pernix
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
RNA 2'-phosphotransferase
|
|
PSI-BLAST
|
Probable RNA 2'-phosphotransferase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical 24.6K protein (iadA-mcrD intergenic region) - Escherichia coli (strain K-12)
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 MAKYNEKELA DTSKFLSFVL RHKPEAIGIV LDREGWADID KLILCAQKAG KRLTRALLDT VVATSDKKRF
0071 SYSSDGRCIR AVQGHSTSQV AISFAEKTPP QFLYHGTASR FLDEIKKQGL IAGERHYVHL SADEATARKV
0141 GARHGSPVIL TVKAQEMAKR GLPFWQAENG VWLTSTVAVE FLEW
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTGGAAAAGG CTCTGCGCAG GATTGAGTTG
-070 CAGAAAATTC ATAAACCAAG TGACAATGAC ATCAGTAAAT AAAAACAGAA AATCCAGGGA CGAAAACGAG
0001 atggcaaagt acaacgaaaa agagctggcg gatacgagca agtttttaag ttttgtcctc cgacacaaac
0071 cggaggcgat tggtatcgta ctggaccgtg aaggatgggc ggatatcgat aagctcatac tttgtgccca
0141 aaaagcgggc aagcggttaa cccgtgcatt gctggatact gtggttgcca ccagcgataa aaagcgtttt
0211 agttattcca gtgatggtag gtgcatccgc gcggttcagg ggcattcgac ttcgcaggtc gctatttcct
0281 ttgccgaaaa aacaccgcca cagtttctct accacggtac ggcaagccgt ttccttgacg agataaaaaa
0351 acaggggctg attgcaggtg agcgtcacta cgtacatctc tctgctgatg aagcaacggc acgcaaagtg
0421 ggagcaagac acggatcgcc ggttatttta accgtcaaag cacaggaaat ggcgaaacga ggcctccctt
0491 tctggcaagc ggaaaacggg gtctggctga catcaacggt tgcggttgag tttcttgagt ggtaaGGGAA
0561 ACTTCCCTCA TGAAGTGACC ACTTGTAGCT TAAATAATTG CACTGTGCTG ATAAGCGCAG CAATAAACAA
0631 CGCCGCCGCG CCGCAGAGAG TGGCG
|
