|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(ompT-fepC)266
,
LD3-15-1Y
(LD)
,
OCR44,45-2 (LD 12-1_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
pauD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
pauD
Search strains by all related name:
pauD b4635 ECK4463
|
General information (Go to Linear View: )
|
|
tRNA Name
|
pauD
|
|
Alternative name
|
b4635,ECK4463
|
|
Location, Length
|
585,280 - 585,324
(
+
)
;
12.61
min
;
45
(bp) ,
|
|
Product
|
tRNA-OTHER
|
|
Operon Name
|
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTCGCAATGG CTTGCAAGGC TTTACATGTT
-070 TTGAGGTAGT GGGACGTGTG AGCGCAGAGA TGGCGCGGTA AGTTGTTGAC TTAAAATGTC GTTCTAGGAA
0001 cttctaagtc gtgggccgca ggttcgaatc ctgcagggcg cgccaTTTCT TCCTCATTTA TGCCCGTCTT
0071 ATCCGTTTCC GCTTTGCCCT TCACCACATC ACTTTTTGTC GCTGTTTGGC GAGATAATTC AACGGTGTCA
0141 GGCCG
|
