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PEC Original Annotations
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Essentiality
|
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Class
|
essential
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References (PMID)
|
|
|
Deletion
|
OCL78
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
leuZ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
leuZ
Search strains by all related name:
leuZ b1909 ECK1908 JWR0033
|
General information (Go to Linear View: )
|
|
tRNA Name
|
leuZ
|
|
Alternative name
|
b1909,ECK1908,JWR0033
|
|
Location, Length
|
1,989,839 - 1,989,925
(
-
)
;
42.89
min
;
87
(bp) ,
|
|
Product
|
tRNA-Leu
|
|
Operon Name
|
glyW-cysT-leuZ
|
|
Note
|
anticodon: GAG
|
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Function
|
|
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Gene Ontology
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PID
|
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EC number
(KEGG Pathway)
|
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
|
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
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Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
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PROSITE
|
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PROSITE
|
|
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MMBR References
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ggcctgaaga atttggcgcg ttaacaaagc
-070 ggttatgtag cggattgcaa atccgtctag tccggttcga ctccggaacg cgcctccact ttcttcccga
0001 gcccggatgg tggaatcggt agacacaagg gatttaaaat ccctcggcgt tcgcgctgtg cgggttcaag
0071 tcccgctccg ggtaccatgg gaaagataag aataaaatca aagcaataag cagtgtcgtg aaaccacctt
0141 cgggtggttt ttttgtgcct gcaacttgtc gttacaccct ccttaat
|
