|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL72
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
proL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
proL
Search strains by all related name:
proL b2189 ECK2183 JWR0042 proW
|
General information (Go to Linear View: )
|
|
tRNA Name
|
proL
|
|
Alternative name
|
b2189,ECK2183,JWR0042,proW
|
|
Location, Length
|
2,284,233 - 2,284,309
(
+
)
;
49.23
min
;
77
(bp) ,
|
|
Product
|
tRNA-Pro
|
|
Operon Name
|
proL
|
|
Note
|
anticodon: GGG
|
|
Function
|
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( proW )
GO:0005886
;
plasma membrane ( proW )
GO:0006810
;
transport ( proW )
GO:0006865
;
amino acid transport ( proW )
GO:0016020
;
membrane ( proW )
GO:0016021
;
integral to membrane ( proW )
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
proW
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
|
MMBR References
|
J Mol Biol. 1990;212(4):579-98.
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
Komine Y, Adachi T, Inokuchi H, Ozeki H.
(
2184240
)
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACGAGAAGCG TTTTATCGCT AACTGATTAA
-070 TTATAAATCA GTTAGCGAAA TATCTTACTT GCAATCGGTG TGGAAAACGG TAGTATTAGC AGCCACGAGT
0001 cggcacgtag cgcagcctgg tagcgcaccg tcatggggtg tcgggggtcg gaggttcaaa tcctctcgtg
0071 ccgaccaAAA ATCCCAAGAA AAAACCAACC CTTACGGTTG GTTTTTTTAT ATCTGCAATT AATTCGATAA
0141 ACAGACCGTG ACACATCACA GCCTGTTTAT TTTCTGT
|
