CLSTF00151     VD

Merge cluster information
Name CLSTF00151
Library ALL 233 cDNA [Download: FASTA]
olea 10 cDNA [Download: FASTA]
olea16a10  olea16n10  olea26g06  olea27d21  olea28f16  olea30m21  olea3d05  olea42c06  olea48g12  olea60h01 
oleb 24 cDNA [Download: FASTA]
oleb14n24  oleb16g19  oleb17i02  oleb18b08  oleb1m10  oleb20f05  oleb20n03  oleb26a14  oleb27f11  oleb27m02  oleb28j07  oleb31b24  oleb32e16  oleb33l17  oleb3f11  oleb40f05  oleb55m12  oleb59h07  oleb5h02  oleb61e13  oleb62h22  oleb63c15  oleb8b06  oleb8n20 
olec 14 cDNA [Download: FASTA]
olec10m04  olec12f05  olec18b12  olec1h07  olec1k12  olec2f20  olec40m24  olec44k12  olec49f11  olec51k14  olec63i15  olec64a19  olec64m19  olec9k20 
olvl 8 cDNA [Download: FASTA]
olvl23i22  olvl2a02  olvl51a01  olvl54a05  olvl55d15  olvl5n03  olvl7n23  olvl8l09 
olli 2 cDNA [Download: FASTA]
olli34e13  olli3e06 
olbr 33 cDNA [Download: FASTA]
olbr13h04  olbr15g09  olbr19g13  olbr19i04  olbr1o03  olbr21a16  olbr21o02  olbr22l17  olbr22m21  olbr22p14  olbr27a09  olbr28m09  olbr29a20  olbr29p24  olbr33f20  olbr33o08  olbr35b08  olbr37m01  olbr38h04  olbr38k05  olbr39f24  olbr3c02  olbr44j17  olbr45n13  olbr48k03  olbr50e16  olbr51i08  olbr53c06  olbr53g22  olbr53o14  olbr59k07  olbr59p23  olbr63e17 
olgi 22 cDNA [Download: FASTA]
olgi10g03  olgi14f13  olgi28h23  olgi29n02  olgi30a21  olgi32c21  olgi34a03  olgi34i05  olgi34l22  olgi37o15  olgi38k20  olgi43f05  olgi49d04  olgi54n16  olgi56o04  olgi5e17  olgi5k18  olgi60n16  olgi65c15  olgi65o16  olgi7i06  olgi7k11 
olki 30 cDNA [Download: FASTA]
olki14g24  olki17i06  olki18o09  olki20a24  olki21i04  olki28a12  olki29p16  olki2f06  olki2h16  olki2p04  olki30c01  olki34l22  olki35c14  olki38e17  olki38f06  olki40p03  olki43n18  olki47d14  olki48d23  olki49f07  olki51e17  olki51e22  olki58f07  olki60o08  olki64h02  olki65b09  olki6d15  olki7a13  olki7e14  olki8m02 
olsp 5 cDNA [Download: FASTA]
olsp13h23  olsp16f05  olsp53e10  olsp60b15  olsp63a19 
olte 68 cDNA [Download: FASTA]
olte10i11  olte12i05  olte12n21  olte13p06  olte15p11  olte16i07  olte16i19  olte1k08  olte20a01  olte20b19  olte21b11  olte21o24  olte22k13  olte23f11  olte23h14  olte25m16  olte25o15  olte28f18  olte28i21  olte29n13  olte2a03  olte2a08  olte2b14  olte2k16  olte2n05  olte2o01  olte30e21  olte31l18  olte33e03  olte34n21  olte37p01  olte38j17  olte39i20  olte3p23  olte40e11  olte42h08  olte42i03  olte43d14  olte43f07  olte46a06  olte46f10  olte47f18  olte48n09  olte4a06  olte51p20  olte52p18  olte53l21  olte53o21  olte54j08  olte57k17  olte58d04  olte58f14  olte58p07  olte60g23  olte60j06  olte61a09  olte63e11  olte63p16  olte66l12  olte68e06  olte68k04  olte68k06  olte6i17  olte6p11  olte7d09  olte8f12  olte9h13  olte9m04 
olova 17 cDNA [Download: FASTA]
olova10a22  olova11b13  olova14e14  olova29e21  olova38a16  olova38l02  olova39d09  olova39j13  olova41d13  olova43g07  olova5o13  olova61a09  olova61p22  olova64l21  olova6d18  olova6g17  olova7f03 

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Contig information - 1
Name Contig1
Clone count 1 clones
Length 1118
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Score 1247
Evalue 5.39607e-135
Detail
Sequence [Download: FASTA]
>Contig1
GAGGGTGTCCGGCATTATTCTCAGCATTCGCAGAGAGCTCGACGTCGTCGTGGAGACTAAATAAG
TATTCGTCTAACAGCCACAAGTTAAAGTTAAAAACATGCAGATCTTTGTCAAGACCCTCACTGGC
AAGACCATCACCCTCGAGGTTGAACCCAGTGACACCATTGAGAACGTGAAGGCTAAAATCCAGGA
CAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCC
GCACCCTCTCCGACTACAACATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGCCTGAGGGGT
GGCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAAGTTGAACCCAGTGA
CACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGC
TGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAA
TCCACCCTCCACCTTGTCCTGCGCCTGAGGGGTGGCATGCAGATCTTTGTCAAGACCCTCACTGG
CAAGACCATCACCCTTGAGGTTGAGCCCAGTGACACCATTGAGAACGTGAAGGCCAAAATCCAGG
ACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGC
CGCACCCTCTCCGACTACAACATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGCCTGAGGGG
TGGCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCAGTGA
CACNTTTGANAACGTGAAGGCTAAATCCAGGACANGAAGGCATNCCCCCTGACNNCANAGGCTGA
TCTTGCTGGCANCACTNGAAAATGGCGCACCCTCTCCGANTAAAAATCCANAAAAATCCNCCCNC
CCCNTTNTCNGNCCCTGANGGGGGGCNNGNCAAATNTTNGTCAAACCCCCNTGGNAAAACCTCCC
CCTTGGNGGTGANCCCGNGACCNTTGGAAANGGGANGGCAAATCCNGGANAGGGAGGNTTNCCCN
TNACNANNAAAGG

Contig information - 2
Name Contig2
Clone count 9 clones
Length 1548
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit PREDICTED: similar to Ubiquitin-63E CG11624-PA, isoform A [Macaca mulatta]
Score 1912
Evalue 0
Detail
Sequence [Download: FASTA]
>Contig2
GGATTTTTGACTGGGCAGTAATTGTTTCGTCACACGTTTTTGTTGTTTGTAGTAATTCAGTGTCG
TCGTTACTGTTTTGTTTTAAAACAACGGTTTTAAAGACAATTGCTGACCTAATTGAATCACAGCG
ACACCAAATTTCTGGCGTCATCGTTATTTGGCCTGAACGTTAGCTAAAGGGAGGAAACCGCTAAC
GATGGCGTTTTGTAAAATCATGGCGCAGCTTCTCGAATCGTCCCCCCGATGAATGAAGATGTTTC
AGGAGAATTACTTATATTCAAGATCACTCATTGACCTGCTTATTGGATTTATGTGAATGTGTAAA
CATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAAGTTGAACCCAGTGACA
CCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTG
ATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGATTACAACATCCAGAAAGAATC
CACCCTCCACCTTGTCCTGCGCCTGAGGGGTGGCATGCAGATCTTTGTCAAGACCCTCACTGGCA
AGACCATCACCCTCGAGGTTGAACCCAGTGACACCATTGAGAACGTGAAAGCTAAAATCCAGGAC
AAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCCGGTAAGCAGCTTGAAGATGGCCG
CACCCTTTCTGACTACAACATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGTCTGAGGGGTG
GCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAACCCAGTGAC
ACCATTGAGAACGTGAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCT
GATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAAT
CCACCCTCCACCTTGTCCTGCGCCTGAGGGGTGGCATGCAGATCTTTGTCAAAACCCTCACTGGC
AAGACCATCACCCTTGAGGTTGAGCCCAGTGACACCATTGAGAACGTGAAGGCTAAAATCCAGGA
CAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCC
GCACCCTCTCCGATTACAACATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGGGGT
GGCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAACCCAGTGA
CACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGC
TGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGATTACAACATCCAGAAAGAA
TCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGCCAGTAAAGTTAAGATTTTCTGTCGCAAAA
ATGACCAAATTATAATTTGATTAAATAAACAGTTTTAAGTGTTAAAAAAAAAA

Contig information - 3
Name Contig3
Clone count 89 clones
Length 912
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit putative ubiquitin C variant 1 [Taeniopygia guttata]
Score 1093
Evalue 2.79998e-117
Detail
Sequence [Download: FASTA]
>Contig3
GACACTTGGACTATTTTTGTTGGCGGATGAATACTTTACGGTCAAATGACGAAATAAAAACGTTC
GTTTTTGAGGCGTGCGCCTTCATTTAGGGTTGCGGCGTTTGTTACCTGTACATCACCAGACACTG
TGTAAACATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAAGTTGAACCCA
GTGACACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAG
AGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGATTACAACATCCAGAA
AGAATCCACCCTCCACCTTGTCCTGCGCCTGAGGGGTGGCATGCAGATCTTTGTCAAGACCCTCA
CTGGCAAGACCATCACCCTCGAGGTTGAACCCAGTGACACCATTGAGAACGTGAAAGCTAAAATC
CAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCCGGTAAGCAGCTTGAAGA
TGGCCGCACCCTTTCTGACTACAACATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGTCTGA
GGGGTGGCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAACCC
AGTGACACCATTGAGAACGTGAAAGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCA
GAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGATTACAACATCCAGA
AAAGAATCCACCCTCCACCTTGTCCCTGCGTTTGAAGGGGTGGCCAGTAAAATGAATGCATGTCA
GCATGTTTTTTACCTGACCTAAATGGCAACCTGACCCAATAAACCGTGATATATCAGTTAANANA
AA

Contig information - 4
Name Contig4
Clone count 121 clones
Length 1460
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit hypothetical protein LOC777766 [Danio rerio]
Score 954
Evalue 7.40471e-101
Detail
Sequence [Download: FASTA]
>Contig4
GATTATTCTCAGCATTCGCAGAGAGCTCGACGTCGTCGTGGAGACTAAATAAGTATTCGTCTAAC
AGCCACAAGTTAAAGTGTAAGTCTGAATTTTAACTATTCAAAGTTTTCCTTTTATTATTTTTTAA
TTCAAAGGCATACTAGTTTTGCTGGCGAACCGTTTCTTCTCCGTTTACATTACGTTGACTCGTAA
TTTAGGATACGGTTTTTTTCTTCCCCCGCCATAAATGTTTATATCCTTTGCCTCTTTTTATTTGA
TAAGCTATAATTTACTTTCAGATAAAAGTAAATGGCAGAAATGCCTGTAGTGCTATTCGACCGAC
GAACAAAGAAGGTCAGCGAGATATCAAAATGGCGCCCTAAGTCTAACTGAAATGGCTGCCCCTGA
CTGTTTGTCCTCAGATATAACGGATAAATTTTACATTACAACAGTGTATACATAGATTTACACGT
TATTTAATTTTAAAACATTTTTTAATTTTTTGTATTTTTGCTCTTTATTTAAAGTAAAAACATGC
AGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAACCCAGTGACACCATT
GAGAACGTGAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTT
TGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAATCCACCC
TCCACCTTGTCCTGCGCCTGAGGGGTGGCATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACC
ATCACCCTTGAAGTTGAACCCAGTGACACCATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGA
AGGCATTCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCC
TCTCCGACTACAACATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGCCTGAGGGGTGGCATG
CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGTGACACCAT
TGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAAGGCATTCCCCCTGACCAGCAGAGGCTGATC
TTTGCTGGCAAGCAGCTTGAAGATGGGCCGCACCCTCTCCGACTACAACATCCAGAAAAGAATCC
ACCCCTCCACCTTTGTCCTGCGCCCTGAGGGGGTGGCATGCAGATCTTTTGTCAAGACCCCTCAC
TGGGCAAGAACCATCACCCCTTGGAGGGTTGAACCCCAGTGGACCCCATTGAGAACGTGAAGGCT
AAAAATCCCAGGGACAAGGGAAGGGCATTCCCCCCTGAACCAGCAAAGGGCTGATCTTTTGCTGG
GCAAGCAACTTGAAAAATGGCCGCACCCTTTCCGAATAAAAATTCCAAAAAGAATCCCCCCTCCC
CTTGTCCTGGCCCTGAGGGGGGGCAGCAAT
/medaka