NBRP Medaka

Medaka Strain
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Home > cDNA/BAC/Fosmid search > cDNA cluster detail

CLSTF00004 VD

Merge cluster information
Name	CLSTF00004
Library	ALL	698	cDNA [Download: FASTA]
	olea	106	cDNA [Download: FASTA] olea10g16 olea10k20 olea11e05 olea11p16 olea12b13 olea12e15 olea13e03 olea13j01 olea13l23 olea13m14 olea13m20 olea14f12 olea15e02 olea17c22 olea17n04 olea18b21 olea18o20 olea19g11 olea19j24 olea19m13 olea1b13 olea1g19 olea20b12 olea20c12 olea21a13 olea21d04 olea21d09 olea21h14 olea22c04 olea23b02 olea23j02 olea26h15 olea26i11 olea27m24 olea28i13 olea29j21 olea2b06 olea2p02 olea30a12 olea30j08 olea31e05 olea31g14 olea31j07 olea31j19 olea31n24 olea32p06 olea33j04 olea34h01 olea34i05 olea34o04 olea35n11 olea36d11 olea36g24 olea36m05 olea37d12 olea37f08 olea37n01 olea3l11 olea40l14 olea40m20 olea41a05 olea42b21 olea42n02 olea43h17 olea44c07 olea44d19 olea44o06 olea45c09 olea45g10 olea45g18 olea46p15 olea47n09 olea48j24 olea48k04 olea4b03 olea4i21 olea50l07 olea51g10 olea51m16 olea52k16 olea52m12 olea54d18 olea54l19 olea55j23 olea56b10 olea57d21 olea57i13 olea57p12 olea58b07 olea58p10 olea5c14 olea5d17 olea60f23 olea61i15 olea61o07 olea62e19 olea62j19 olea63a01 olea64h07 olea64k04 olea64l17 olea65h14 olea6g04 olea6m12 olea7p24 olea8k12
	oleb	92	cDNA [Download: FASTA] oleb11c02 oleb11f15 oleb13a16 oleb13c03 oleb13p08 oleb14a07 oleb16k10 oleb16p17 oleb17a17 oleb18k07 oleb18k23 oleb18o24 oleb19h07 oleb19j06 oleb19m12 oleb20c13 oleb20e17 oleb20l17 oleb21a09 oleb21c05 oleb21c24 oleb21m08 oleb21m12 oleb22i11 oleb22k22 oleb24a06 oleb24l16 oleb24o11 oleb25e23 oleb25p14 oleb26n13 oleb26p16 oleb27e07 oleb28a02 oleb2c13 oleb2c17 oleb2k14 oleb30b07 oleb30l01 oleb30m02 oleb30m14 oleb30o10 oleb30p12 oleb30p24 oleb31l16 oleb31p19 oleb32f03 oleb33k23 oleb33n24 oleb34j08 oleb38h07 oleb38m04 oleb39e19 oleb3f09 oleb3j02 oleb41a22 oleb41h19 oleb41m20 oleb42n05 oleb44b20 oleb44l03 oleb45o04 oleb47c11 oleb47d24 oleb47g23 oleb47i08 oleb4o07 oleb50h03 oleb50j10 oleb50k10 oleb50l18 oleb50o03 oleb51k07 oleb52m15 oleb53p09 oleb54g13 oleb54i22 oleb57e08 oleb57h10 oleb57l24 oleb58o02 oleb5e14 oleb60d11 oleb60j15 oleb61i04 oleb62d21 oleb64p24 oleb6m04 oleb7c04 oleb7m16 oleb8j17 oleb8o10
	olec	84	cDNA [Download: FASTA] olec10f01 olec10k21 olec12c08 olec12h04 olec12k05 olec13o06 olec15c13 olec15f11 olec17l21 olec17p09 olec19b01 olec19d07 olec19g13 olec19n15 olec1j13 olec20f04 olec21h16 olec21k23 olec22d16 olec22g14 olec22n24 olec23d16 olec24o12 olec25e18 olec25m10 olec27n18 olec27n19 olec2g13 olec32h04 olec32i07 olec32k12 olec32m07 olec32o21 olec33j21 olec35g20 olec35k08 olec36e01 olec36e02 olec38i04 olec39d05 olec39e20 olec40g14 olec41g15 olec41n13 olec41p04 olec42f04 olec42i03 olec44e12 olec45h17 olec46k15 olec47b09 olec47b21 olec48b02 olec48m18 olec49k19 olec50m03 olec52e09 olec52g08 olec52k08 olec54i05 olec55m11 olec56g01 olec56i01 olec57d02 olec57g07 olec57p08 olec59c02 olec59p14 olec5j24 olec60a14 olec60h20 olec61p09 olec62m22 olec63a15 olec63l22 olec64a16 olec65d16 olec65f10 olec65f15 olec65n18 olec6d17 olec6e08 olec7n17 olec9a23
	olvl	99	cDNA [Download: FASTA] olvl10e23 olvl11d24 olvl11h17 olvl11j01 olvl12e02 olvl13l16 olvl13m04 olvl16m10 olvl18j19 olvl18p06 olvl19m06 olvl19n22 olvl1a06 olvl1a10 olvl20d16 olvl20d19 olvl20e03 olvl20h11 olvl20m06 olvl20n22 olvl21e18 olvl22d03 olvl22f14 olvl22h21 olvl22p19 olvl25a06 olvl28l11 olvl28m20 olvl29g02 olvl29h20 olvl29j08 olvl31e19 olvl31j14 olvl31n13 olvl31p08 olvl32l01 olvl33e10 olvl33l17 olvl33m11 olvl33n03 olvl35d18 olvl35h21 olvl35l08 olvl36n07 olvl37e22 olvl37l06 olvl38e22 olvl38i17 olvl38j17 olvl38p18 olvl38p24 olvl39j17 olvl3d03 olvl3l05 olvl40c10 olvl40l17 olvl41l20 olvl43f03 olvl43f20 olvl43h05 olvl44l07 olvl45k04 olvl4o23 olvl50n14 olvl51j23 olvl52f23 olvl53h12 olvl54b02 olvl54j02 olvl55c09 olvl56c02 olvl56f08 olvl56i03 olvl56l05 olvl56l06 olvl56m09 olvl57a06 olvl57i03 olvl58f14 olvl59e24 olvl59k22 olvl5c04 olvl5l03 olvl60d21 olvl60k22 olvl62h08 olvl63j14 olvl63k23 olvl63n15 olvl64n12 olvl6c16 olvl6o09 olvl7e23 olvl7n02 olvl8f11 olvl8n02 olvl8o15 olvl9e23 olvl9f17
	olli	54	cDNA [Download: FASTA] olli12a05 olli12g14 olli13i13 olli14d24 olli14f15 olli15j06 olli18e17 olli18l21 olli18n23 olli19a20 olli1b07 olli20e02 olli27a01 olli29f04 olli29g11 olli2m16 olli30c11 olli31a22 olli32k20 olli32p21 olli34d03 olli34j04 olli35f12 olli35g01 olli37j20 olli40d01 olli42a20 olli42e10 olli42p12 olli45f11 olli45m18 olli46e01 olli46e07 olli47b04 olli47b18 olli51o18 olli53l10 olli55e24 olli55o18 olli56d07 olli57f12 olli58a20 olli58d11 olli5n17 olli5p18 olli61a19 olli61m20 olli61n18 olli62p10 olli63m14 olli63m24 olli65h17 olli6b20 olli8i03
	olbr	44	cDNA [Download: FASTA] olbr11i06 olbr13i03 olbr13k15 olbr14l01 olbr16b03 olbr17n02 olbr1g04 olbr20j07 olbr23l21 olbr24c01 olbr24g02 olbr25p21 olbr26e17 olbr2m10 olbr30a05 olbr30n24 olbr32j08 olbr34p09 olbr35l05 olbr35o05 olbr39g21 olbr44d17 olbr44l01 olbr45a17 olbr47e07 olbr47p18 olbr48p21 olbr52e14 olbr52g09 olbr53a03 olbr53n14 olbr55n13 olbr57f21 olbr61l22 olbr62g18 olbr62h17 olbr63i03 olbr63p04 olbr64g24 olbr64h13 olbr64j20 olbr65h03 olbr8n24 olbr9f20
	olgi	62	cDNA [Download: FASTA] olgi11h21 olgi11i02 olgi13g06 olgi14f14 olgi15p22 olgi17l21 olgi18d19 olgi19g21 olgi19p20 olgi21k24 olgi21l20 olgi21o03 olgi22k19 olgi25k04 olgi25k10 olgi25p09 olgi27c15 olgi28g03 olgi28n04 olgi29a12 olgi29k12 olgi2a24 olgi2e17 olgi30h06 olgi30i22 olgi33n18 olgi33p09 olgi34c19 olgi34p18 olgi36o11 olgi37m04 olgi37o10 olgi38g04 olgi39a07 olgi3f24 olgi44b09 olgi44p15 olgi46i19 olgi46o02 olgi4d01 olgi4i21 olgi52e24 olgi53m02 olgi54o10 olgi55b13 olgi56l03 olgi57n15 olgi58d14 olgi5m05 olgi61l01 olgi62b11 olgi62f14 olgi63c24 olgi63o24 olgi65g08 olgi65j17 olgi65l02 olgi6f02 olgi7m15 olgi8d08 olgi9k07 olgi9o09
	olki	47	cDNA [Download: FASTA] olki18l24 olki19j01 olki22b10 olki24a10 olki24e23 olki29g16 olki29o12 olki2p19 olki30j07 olki31e16 olki31k19 olki32g09 olki32m17 olki33p03 olki34m04 olki34n04 olki37h15 olki39e18 olki40k05 olki40p12 olki41e06 olki42g08 olki42n10 olki43a05 olki46g19 olki46i21 olki47n09 olki49f13 olki49g10 olki52e10 olki52h11 olki52k08 olki53d21 olki53e15 olki53k05 olki53n14 olki54f09 olki55n19 olki56k15 olki57f01 olki59o11 olki61d10 olki61f09 olki61j17 olki61o20 olki6h03 olki6i16
	olsp	39	cDNA [Download: FASTA] olsp12k19 olsp13f20 olsp13h21 olsp14e19 olsp17g08 olsp20d07 olsp20o21 olsp26f11 olsp27h04 olsp32o14 olsp33c07 olsp33d16 olsp37j15 olsp37p01 olsp38o03 olsp41i07 olsp41j15 olsp43c09 olsp43g08 olsp46j21 olsp47a18 olsp47n02 olsp47o11 olsp48a15 olsp4h11 olsp50n08 olsp51e11 olsp52c01 olsp52d07 olsp55f21 olsp55p04 olsp56h16 olsp58c24 olsp60a04 olsp60l09 olsp62e24 olsp64g10 olsp64h03 olsp64h10
	olte	49	cDNA [Download: FASTA] olte10j12 olte10n21 olte12m23 olte14c11 olte17i18 olte1n19 olte20m04 olte21g17 olte21j03 olte22j12 olte26p18 olte28g22 olte28j15 olte28m03 olte29a03 olte29h17 olte30e23 olte31m07 olte31p22 olte33g19 olte37f07 olte37j08 olte37l09 olte38a23 olte38h18 olte42d14 olte43g17 olte43k21 olte44j10 olte46a09 olte48f22 olte4m06 olte4p22 olte52e18 olte53l19 olte54b13 olte55h24 olte56h18 olte57e17 olte60h14 olte61d02 olte61l01 olte62d20 olte63f12 olte65k08 olte67p12 olte68m03 olte69h04 olte6g22
	olova	22	cDNA [Download: FASTA] olova12e19 olova12h11 olova12i08 olova14a05 olova16l21 olova16p22 olova25n10 olova26f03 olova32c07 olova36m20 olova37a02 olova3k07 olova40f12 olova42a22 olova44e19 olova46m23 olova48m11 olova53i03 olova55j22 olova60d05 olova6a05 olova6a11

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Contig information - 1
Name	Contig1
Clone count	1 clones
Length	603
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	PREDICTED: ADP-ribosylation factor-like 6 interacting protein [Taeniopygia guttata]
Score	583
Evalue	1.65936e-58
Detail
Sequence	[Download: FASTA] >Contig1 GCTCTTTCCGCCATATTGCAAAACCGGCATCATGGTGCGCATGAACGTTCTTGCAGATGCTCTGA AAAGCATCAACAATGCAGAGAAGCGTGGGAAACGCCAGGTCCTCATCAGGCCGTGCTCCAAGGTT ATAGTGCGCTTCCTAACCGTCATGATGAAGCACGGTAAGACGCTTTGCCCCTGCTTCCTGCAGGA GTGGTGGTCGGCAGAGCCATCACAGGATGTGTGCCGCTAGCATCATCTCTGAATCCCAGCTGTTG GCGGGTTTCTTTTGTGTGAACGTGTGCTTTCTCTTCTTGCTCACGCAGGTTACATTGGTGAGTTT GAGATCATCGACGACCATAGAGCTGGAAAAATTGTCGTCAATCTCACAGGCAGGCTGAACAAGTG TGGCGTGATCAGCCCACGTTTTGATCTTCAGCTCAAGGATCTGGAGAAGTGGCAGAACAACCTGC TGCCCTCAAGACAGTTTGGGTACATTGTGCTGACCACCTCAGCCGGCATCATGGACCACGAAGAG GCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAGATGTAAAGAACTGCAA ATAAAAACAACCAGAANA

Contig information - 2
Name	Contig2
Clone count	155 clones
Length	559
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	ribosomal protein S15a, isoform CRA_b [Mus musculus]
Score	677
Evalue	1.71748e-69
Detail
Sequence	[Download: FASTA] >Contig2 GATAATGCACAGCGCTTCCTATCTCCTTCCTCTTTCCGCCATATTGCAAAACCGGCATCATGGTG CGCATGAACGTTCTTGCAGATGCTCTGAAAAGCATCAACAATGCAGAGAAGCGTGGGAAACGCCA GGTCCTCATCAGGCCGTGCTCCAAGGTTATAGTGCGCTTCCTAACCGTCATGATGAAGCACGGTT ACATTGGTGAGTTTGAGATCATCGACGACCATAGAGCTGGAAAAATTGTCGTCAATCTCACAGGC AGGCTGAACAAGTGTGGCGTGATCAGCCCACGTTTTGATCTTCAGCTCAAGGATCTGGAGAAGTG GCAGAACAACCTGCTGCCCTCAAGACAGTTTGGGTACATTGTGCTGACCACCTCAGCCGGCATCA TGGACCACGAAGAGGCCAGACGGAAACACACAGGAGGCAAAATCCTTGGATTCTTTTTCTAAGAT GTAAAGAACTGCAAATAAAAACAACCAGAAAAAGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAANNANANNCNNAAANAAAA

/medaka