Update information
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April 2nd, 2024:
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NBRP Medaka International Workshop 2024 "Medaka as a new model for studies of biological phenomena in fluctuating environments" will be held at NIBB by NBRP Medaka.
Participation is free of charge, but we kindly ask you to register in order to estimate the number of participants.
All talks will be in English.
Date: April 26-27, 2024
Venue: National Institute of Basic Biology: Room 111 (1F)
For more information, please visit the following website.
https://sites.google.com/nibb.ac.jp/nbrp-medaka-workshop/home-program
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March 31th, 2023:
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March 31th, 2023:
Ladies and gentlemen.
The 38th International Prize of Biology Commemorative Symposium “Fish Biology: Ecology, Evolution and Development” (held on December 17-18, 2022) [On-demand lecture video distribution] site has been created.
This symposium is a recording and distribution of lectures from an international symposium held on December 17-18, 2022 to commemorate Professor Emeritus Katsumi Tsukamoto’s International Prize of Biology.
Renowned researchers and young researchers from Japan and abroad give lectures on their respective research topics. Please enjoy it from the following URL.
https://convention.gtcenter.jp/ipbsympo38/
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February 3rd, 2023:
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Dear all.
We regret to inform you that we have changed the contact email address for Medaka Bioresource project (NBRP Medaka) to the following.
nbrp.medaka[at]bioresource.jp
We have been using the bioresource.jp domain since we acquired it -
Please use nbrp.medaka[at]bioresource.jp as an official contact address.
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December 19th, 2022:
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December 16th, 2022:
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Commemorative Symposium for the 38th International Prize for Biology
"Biology of Fishes: Ecology, Evolution and Development"
Dec. 17th-18th, 2022
Okazaki Conference Center (Aichi, Japan)
Hybrid Meeting
https://www.nibb.ac.jp/ipbsympo38/#top
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October 19th, 2021:
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3D atlas and single cell transcriptome data of medaka pituitary have been published from Prof. Weltzien group in Norwegian University of Life Sciences, Oslo Norway.
Dr. FONTAINE kindly provided us with this important information for the medaka community.
https://www.nmbu.no/en/faculty/vet/departments/prepat/groups/weltzienlab/projects/mpg-atlas
References
Characterization of hormone-producing cell types in the teleost pituitary gland using single-cell RNA-seq K Siddique, E Ager-Wick, R Fontaine, FA Weltzien, CV Henkel - 2021 Scientific data
3D Atlas of the Pituitary Gland of the Model Fish Medaka (Oryzias latipes) M R Royan, K Siddique, G Csucs, M A. Puchades, R Nourizadeh-Lillabadi, J G Bjaalie, C V. Henkel, F-A Weltzien and R Fontaine - 2021 Frontiers in Endocrinology
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April 21th, 2021:
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The following 3 items have been added to the NBRP Medaka site as
related material items.
1. The 2021 is 100 memorial year for publication of " AIDA, T., 1921
On the inheritance of color in a fresh-water fish Aplocheilus latipes
Temmick and Schlegel, with special reference to sex-linked
inheritance. Genetics 6: 554-573". This article (Life as my teacher,
Tatsuo Aida by Dr. Takeuchi ) is posted with the permission of the
author and Ms. Yoshiko Aida, daughter of Dr. Aida. Please take a look
at this valuable article about the life of Dr. Tatsuo Aida, the "Giant
of Medaka Genetics", which is directly spoken by Dr. Takeuchi, the
only disciple of Dr. Aida.
2. and 3. are two books published by Professor Emeritus Kunisuke
Takeuchi of Nagoya Gakuin University with the permission of Dr.
Kunisuke Takeuchi. Written in simple words, they are all interesting
experiments. We hope that you will use it as a reference for student
experiments in junior high school and high school.
1. Life as my teacher, Tatsuo Aida (written by Tetsuro Takeuchi)
(https://shigen.nig.ac.jp/medaka/download/202004_life_of_my_teacher_tatsuo_AIDA.pdf)
2. Biological experiments for elementary, junior high and high school
students (written by Kunisuke Takeuchi)
(https://shigen.nig.ac.jp/medaka/download/2014_biological_experiment.pdf)
3. Experiment of medaka that anyone can do (by Kunisuke Takeuchi)
(https://shigen.nig.ac.jp/medaka/download/2014_medaka_experiment.pdf)
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August 20th, 2020:
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July 27th, 2020:
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We have reported a dynamic transcriptome landscape of medaka embryogenesis profiled by long-read RNA-seq, short-read RNA-seq, and ATAC-seq (Li Y, Liu Y, Yang H, Zhang T, Naruse K, Tu Q. 2020. Dynamic transcriptional and chromatin accessibility landscape of medaka embryogenesis.Genome Res 30: 924–937) . To facilitate the use of these datasets, We made medaka omics portal (http://tulab.genetics.ac.cn/medaka_omics/) with three tools (Genome Browser (JBrowse), Gene Viewer (Shiny) and Sequence Search (BLAST)). Please enjoy!
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October 29th, 2019:
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August 29th, 2019:
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March 27th, 2019:
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We re-opened wild populations and related species from Utsunomiya University.
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January 29th, 2019:
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This is our great pleasure to announce the web version of the DVD accompanied with Medaka; Biology, Management, and Experimental Protocols which published from Wiley-Blackwell (ISBN 978-0-8138-0871-0) on 2009. All figures, photos, movies tables and some protocols accompanied with this book has been uploaded. Second version of this book will be published around September 2019. We plan to provide the figures, photos and tables in volume 2 with the same way. There are no main text in this site but we believe this website still contain several important and interesting information for medaka researchers.
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January 28th, 2019:
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We provide Medaka Mutants Phenotype Metadata, which describe the phenotype of medaka mutants using GO and Anatomy terms. This help you to compare the mutants phenotype between different organisms. This database is made by the Database Integration Coordination Program of National Bioscience Database Center.
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August 31st, 2018:
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Paramecium good for medaka/zebrafish juvenile is available from NBRP Paramecium at Yamaguchi University.
Please click here.
For MTA sample to order.
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February 7th, 2018:
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December 18th, 2017:
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June 6th, 2017:
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April 14th, 2017:
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Meeting Announcement: The 23rd Japanese Medaka and Zebrafish Meeting takes place in Yamanashi on Aug. 30-31, 2017. Please click here.
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June 27th, 2016:
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June 7th, 2016:
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Tg(PIRE1alpha-EYFP-ER)(TG1008), Tg(PIRE1alpha-EYFP-ER)2(TG1009), Tg(PIRE1alpha-tagCFP-mito)(TG1010), Tg(PIRE1alpha-tagCFP-mito)2(TG1011), Tg(PLUMAN-EYFP-ER)(TG1012), Tg(PLUMAN-EYFP-ER)2(TG1013), Tg(PLUMAN-tagCFP-mito)(TG1014), Tg(PLUMAN-tagCFP-mito)2(TG1015), Tg(PLUMAN-Venus)(TG1016), Tg(PLUMAN-Venus)2(TG1017), Tg(Pbeta-actin-EYFP-ER)(TG1018), Tg(Pbeta-actin-mCherry-golgi)(TG1019), Tg(Pbeta-actin-tagCFP-mito)(TG1020), Tg(Pbeta-actin-tagCFP-mito)2(TG1021) were added to Strains.
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May 19th, 2016:
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Meeting Announcement: The 22th Japanese Medaka and Zebrafish Meeting takes place in Okazaki on Aug. 20-21. Please click here.
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May 19th, 2016:
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Practical Course Announcement: The 9th NIBB International Practical Course takes place in Okazaki on Aug. 18-30. Please click here.
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April 12th, 2016:
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December 25th, 2015:
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December 25th, 2015:
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November 6th, 2015:
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October 22th, 2015:
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June 12th, 2015:
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February 19th, 2015:
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February 6th, 2015:
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October 22th, 2014:
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July 4th, 2014:
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June 19th, 2014:
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June 11th, 2014:
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March 18th, 2014:
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March 10th, 2014:
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January 29th, 2014:
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September 26th, 2013:
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August 27th, 2013:
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July 3th, 2013:
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New fees from July 2013 at Niigata University
The fees and the fees collection system of Niigata University were previously shared with the National Institute for Basic Biology (NIBB).
As Niigata University recently established its own fees collection system, the fees for medaka resources from Niigata University have been changed.
The fees for medaka resources from NIBB, however, remain unchanged.
Please refer to the following page for details regarding the new fees at Niigata University.
http://www.shigen.nig.ac.jp/medaka/strain/fee.jsp
Thank you for your support of NBRP Medaka,
Best wishes
Mitsuru Sakaizumi from Niigata University and Kiyoshi Naruse from NIBB
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May 21th, 2013:
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April 10th, 2013:
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February 15th, 2013
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November 16th, 2012
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August 31th, 2012
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July 10th, 2012
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June 25th, 2012
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June 19th, 2012
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Meeting Announcement: 18th Japanese Medaka and Zebrafish Meeting takes place in Kyoto (Sep. 22nd-23rd). Please click here.
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May 24th, 2012
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May 7th, 2012
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The overview of Medaka TILLING was updated. Please click here.
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July 28th, 2011
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June 6th, 2011
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"Medaka: Model for Organogenesis, Human Disease and Evolution" was published。 Please click here in detail.
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April 5th, 2011
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Medaka Tree was updated. Wild medaka photos are available.
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March 31th, 2011
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EST clones by Nagahama lab in NIBB were added to cDNA/BAC/Fosmid.
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March 24th, 2011
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The overview of Medaka TILLING was updated. Please click here.
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Nov 12th, 2010
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Medaka Tilling strains were added to the NBRP Medaka. The request form is here.
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October 1, 2010
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Medaka cDNA for HNI were added to cDNA/BAC/Fosmid.
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September 14, 2010
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Medaka cDNA for MF01 were added to cDNA/BAC/Fosmid.
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Aug 18, 2010
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We added the whole genome shotgun sequence data of Hd-rR inbrad line by the next generation sequencer (Illumina GAIIx) to BLAST database. These data have been provided by Dr. Atsushi Shimizu (Department of Molecular Biology) , Keio-Med Open Access Facility.
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May 19, 2010
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We began to supply a sample of medaka fry food for you.
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April 13, 2010
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MF01FFA and MF015DA were added to cDNA/BAC/Fosmid.
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March 01, 2010
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February 15, 2010
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5 strains were added to Strains
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November 05, 2009
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Clones from gill (olgi), kideny (olki), female liver (olli) and spleen(olsp) libraries are now available.
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October 01, 2009
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The olte library were added to Non redundant full length cDNA sequences.
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September 28, 2009
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Gill(olgi),Kideny(olki),female liver(olli), Spleen(olsp) library was added to the cDNA.
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July 31, 2009
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Panel exhibition at the 6th European Zebrafish meeting.here.
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July 24, 2009
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Assembled contig sequences from 5' and 3' sequences of each clone are available. please crick here.
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June 22, 2009
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May 28, 2009
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The 12,254 BAC end sequences were added to the cDNA/BAC/Fosmid database.
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May 19, 2009
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"Lecture of a conference" was added to the side menu bar in the NBRP Medaka site.
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May 15, 2009
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The 7590 clones were added to Non redundant full length cDNA sequences.
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May 1, 2009
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The 1103 clones were added to Non redundant full length cDNA sequences.
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March 13, 2009
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Olte library was added to the cDNA.
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March 4, 2009
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January 15, 2009
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3 strains were added to the transgenic strain.
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December 26, 2008
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Quick Search became able to search cDNA/BAC/Fosmid.
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October 17, 2008
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We began to supply a hatching enzyme for you.
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July 14, 2008
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Genome Homology data were added to cDNA, BAC and Fosmid.
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Jun 30, 2008
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We are pleased to release new design of NBRP-Medaka web page.
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Medaka full length cDNA clones and BAC/Fosmid clones are now available.
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O. latipes·Hd-rR
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GOLWFno100_a08
]
