|
|
|
Locus Name |
D2Mit456 |
Chromosome |
2
|
MGI Position (cM) |
86.3
|
Position (cM) |
86.8
|
Ensembl Chromosome |
2
|
Position (bp)(Length)(Chr.)(OLD) |
168627582-168627704 (123) (Chr.2)
|
Position (GRCm38) |
168936377-168936499 (123) (Chr.2)
|
Contact person |
Yoshiaki KIKKAWA |
Sequence |
Complete Sequence
|
|
Polymorphism |
CAST>SWR=129>NC=DBA=SK/Cam>A/J=SM>CBA>PGN2>BLG2>MSM=JF1=SWN>NJL>B6 |
Strains / Fragments (bp) |
B6
|
SM
|
SWR
|
129
|
A/J
|
CBA
|
DBA
|
NC
|
PGN2
|
SK/Cam
|
NJL
|
BLG2
|
SWN
|
MSM
|
JF1
|
CAST
|
125 |
171 |
175 |
175 |
171 |
170 |
174 |
174 |
169 |
174 |
146 |
168 |
167 |
167 |
167 |
197 |
|
|
|
PCR table |
MgCl2 (mM) |
1.5 |
Taq polymerase |
AmpliTaq Gold |
Thermal cycler |
GeneAmp 9700 |
PCR buffer |
AmpliTaq Gold buffer |
|
denature |
anneal |
extension |
cycle |
extension step (72 c) |
pcr |
cycle 1 |
c |
94 |
55 |
72 |
40 |
|
min |
0.5 |
0.5 |
1 |
cycle 2 |
c |
|
|
|
|
|
min |
|
|
|
cycle 3 |
c |
|
|
|
|
|
min |
|
|
|
remarks |
|
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|